RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 USP17L2Q6R6M4 530 aa14.87□□□□□ -0.03
SMARCD2-209ENST00000581832 EVI5LQ96CN4 794 aa14.87□□□□□ -0.03
SMARCD2-209ENST00000581832 FSD1Q9BTV5 496 aa14.87□□□□□ -0.03
SMARCD2-209ENST00000581832 KIAA1683Q9H0B3 1180 aa14.87□□□□□ -0.03
SMARCD2-209ENST00000581832 CABP5Q9NP86 173 aa14.87□□□□□ -0.03
SMARCD2-209ENST00000581832 ZBTB47Q9UFB7 747 aaPredicted RBP14.87□□□□□ -0.03
SMARCD2-209ENST00000581832 PNMA3Q9UL41 463 aa14.87□□□□□ -0.03
SMARCD2-209ENST00000581832 PTCH2Q9Y6C5 1203 aa14.87□□□□□ -0.03
SMARCD2-209ENST00000581832 RLFQ13129 1914 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 PDE4DIPQ5VU43 2346 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 GNAT2P19087 354 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 OSBPP22059 807 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 ARHGEF6Q15052 776 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 FAM110CQ1W6H9 321 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 TICAM2Q86XR7 235 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 IFNL3Q8IZI9 196 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 ANKRD13CQ8N6S4 541 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 ARMC5Q96C12 935 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 P2RX7Q99572 595 aaKnown RBP14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 TMOD4Q9NZQ9 345 aa14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 ARPP21Q9UBL0 812 aaPredicted RBP14.86□□□□□ -0.03
SMARCD2-209ENST00000581832 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
SMARCD2-209ENST00000581832 PABPC4Q13310 644 aaKnown RBP eCLIP14.85□□□□□ -0.03
SMARCD2-209ENST00000581832 KIF22Q14807 665 aa14.85□□□□□ -0.03
SMARCD2-209ENST00000581832 TMEM179Q6ZVK1 233 aa14.85□□□□□ -0.03
SMARCD2-209ENST00000581832 SMCR8Q8TEV9 937 aaPredicted RBP14.85□□□□□ -0.03
SMARCD2-209ENST00000581832 CCDC17Q96LX7 622 aa14.85□□□□□ -0.03
SMARCD2-209ENST00000581832 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.85□□□□□ -0.03
SMARCD2-209ENST00000581832 SRRDQ9UH36 339 aa14.85□□□□□ -0.03
SMARCD2-209ENST00000581832 PEX10O60683 326 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 ECM2O94769 699 aaPredicted RBP14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 GCLCP48506 637 aaPredicted RBP14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 PRMT2P55345 433 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 KIAA1755Q5JYT7 1200 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 CCDC129Q6ZRS4 1044 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 CLEC10AQ8IUN9 316 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 TXNRD2Q9NNW7 524 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 MORF4L1Q9UBU8 362 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 PLXNB2O15031 1838 aa14.84□□□□□ -0.03
SMARCD2-209ENST00000581832 RBBP6Q7Z6E9 1792 aaKnown RBP14.83□□□□□ -0.03
SMARCD2-209ENST00000581832 MPHOSPH10O00566 681 aaKnown RBP14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 FMNL1O95466 1100 aaPredicted RBP14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 VCAM1P19320 739 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 RASA1P20936 1047 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 PDE4AP27815 886 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 USP14P54578 494 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 SOX10P56693 466 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 HERVK_113P62684 666 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 ZYXQ15942 572 aaKnown RBP14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 CATSPERGQ6ZRH7 1159 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 AMOTL1Q8IY63 956 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 ZNF333Q96JL9 665 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 HELLSQ9NRZ9 838 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 GABRQQ9UN88 632 aa14.83□□□□□ -0.04
SMARCD2-209ENST00000581832 PARP14Q460N5 1801 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 A0A0D9SFI3 127 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 FCGRTP55899 365 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 IRX3P78415 501 aaPredicted RBP14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 PRKCZQ05513 592 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 Q3C1V9 767 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 VPS53Q5VIR6 699 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 LBX2Q6XYB7 198 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 FAM227BQ96M60 508 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 TMX2Q9Y320 296 aa14.82□□□□□ -0.04
SMARCD2-209ENST00000581832 MINDY4BA8MYZ0 360 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L15C9J2P7 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L13C9JLJ4 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L11C9JVI0 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L18D6R9N7 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L22D6RA61 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L17D6RBQ6 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L19D6RCP7 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L20D6RJB6 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 CNMDO75829 334 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 HOXD10P28358 340 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 USP17L24Q0WX57 530 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 FEZ1Q99689 392 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 GJD2Q9UKL4 321 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 TACC3Q9Y6A5 838 aa14.81□□□□□ -0.04
SMARCD2-209ENST00000581832 IGKV6D-41A0A0C4DH26 115 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 POTEFA5A3E0 1075 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 APPP05067 770 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 EEF2P13639 858 aaKnown RBP14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 TDO2P48775 406 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 ICA1Q05084 483 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 NMIQ13287 307 aaPredicted RBP14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 ALX1Q15699 326 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 SLC9C1Q4G0N8 1177 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 MCMDC2Q4G0Z9 681 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 ZNF589Q86UQ0 364 aaPredicted RBP14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 SH3TC2Q8TF17 1288 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 RPAP3Q9H6T3 665 aaPredicted RBP14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 KANSL2Q9H9L4 492 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 MYPNQ86TC9 1320 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 MYH4Q9Y623 1939 aa14.8□□□□□ -0.04
SMARCD2-209ENST00000581832 SDSP20132 328 aa14.79□□□□□ -0.04
SMARCD2-209ENST00000581832 FLT3LGP49771 235 aa14.79□□□□□ -0.04
SMARCD2-209ENST00000581832 IRF5Q13568 498 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms