RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SMIM22K7EJ46 135 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 GPAA1O43292 621 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 CDK8P49336 464 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 USP14P54578 494 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 ZYXQ15942 572 aaKnown RBP23.39■■□□□ 1.33
SREBF1-220ENST00000581707 FAM110CQ1W6H9 321 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 B4GALNT3Q6L9W6 998 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 GIMAP6Q6P9H5 292 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 P2RX7Q99572 595 aaKnown RBP23.39■■□□□ 1.33
SREBF1-220ENST00000581707 LNPKQ9C0E8 428 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 KIAA1683Q9H0B3 1180 aa23.39■■□□□ 1.33
SREBF1-220ENST00000581707 MYPNQ86TC9 1320 aa23.38■■□□□ 1.33
SREBF1-220ENST00000581707 M0R2C6 588 aa23.38■■□□□ 1.33
SREBF1-220ENST00000581707 GNAT2P19087 354 aa23.38■■□□□ 1.33
SREBF1-220ENST00000581707 TMEM179Q6ZVK1 233 aa23.38■■□□□ 1.33
SREBF1-220ENST00000581707 C16orf86Q6ZW13 317 aa23.38■■□□□ 1.33
SREBF1-220ENST00000581707 C12orf42Q96LP6 360 aa23.38■■□□□ 1.33
SREBF1-220ENST00000581707 ARPP21Q9UBL0 812 aaPredicted RBP23.38■■□□□ 1.33
SREBF1-220ENST00000581707 SBK1Q52WX2 424 aa23.37■■□□□ 1.33
SREBF1-220ENST00000581707 RAET1EQ8TD07 263 aa23.37■■□□□ 1.33
SREBF1-220ENST00000581707 ZNF333Q96JL9 665 aa23.37■■□□□ 1.33
SREBF1-220ENST00000581707 CCDC17Q96LX7 622 aa23.37■■□□□ 1.33
SREBF1-220ENST00000581707 KIAA0100Q14667 2235 aaKnown RBP23.37■■□□□ 1.33
SREBF1-220ENST00000581707 TNPO2O14787 897 aaKnown RBP23.36■■□□□ 1.33
SREBF1-220ENST00000581707 PRKCZQ05513 592 aa23.36■■□□□ 1.33
SREBF1-220ENST00000581707 SH3TC2Q8TF17 1288 aa23.36■■□□□ 1.33
SREBF1-220ENST00000581707 SEC62Q99442 399 aaKnown RBP23.36■■□□□ 1.33
SREBF1-220ENST00000581707 PATL2C9JE40 543 aaKnown RBP23.35■■□□□ 1.33
SREBF1-220ENST00000581707 APPP05067 770 aa23.35■■□□□ 1.33
SREBF1-220ENST00000581707 AKR1B1P15121 316 aa23.35■■□□□ 1.33
SREBF1-220ENST00000581707 HERVK_113P62684 666 aa23.35■■□□□ 1.33
SREBF1-220ENST00000581707 ZMYM1Q5SVZ6 1142 aa23.35■■□□□ 1.33
SREBF1-220ENST00000581707 EVI5LQ96CN4 794 aa23.35■■□□□ 1.33
SREBF1-220ENST00000581707 MORF4L1Q9UBU8 362 aa23.35■■□□□ 1.33
SREBF1-220ENST00000581707 GABRQQ9UN88 632 aa23.35■■□□□ 1.33
SREBF1-220ENST00000581707 DOCK3Q8IZD9 2030 aa23.35■■□□□ 1.33
SREBF1-220ENST00000581707 MINDY4BA8MYZ0 360 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L15C9J2P7 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L13C9JLJ4 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L11C9JVI0 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L18D6R9N7 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L22D6RA61 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L17D6RBQ6 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L19D6RCP7 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L20D6RJB6 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 TDO2P48775 406 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 NUCB1Q02818 461 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 USP17L24Q0WX57 530 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 CHD1LQ86WJ1 897 aa23.34■■□□□ 1.33
SREBF1-220ENST00000581707 A0A1W2PRG0 241 aa23.33■■□□□ 1.33
SREBF1-220ENST00000581707 POTEFA5A3E0 1075 aa23.33■■□□□ 1.33
SREBF1-220ENST00000581707 VCAM1P19320 739 aa23.33■■□□□ 1.33
SREBF1-220ENST00000581707 GRK4P32298 578 aa23.33■■□□□ 1.33
SREBF1-220ENST00000581707 COA7Q96BR5 231 aa23.33■■□□□ 1.33
SREBF1-220ENST00000581707 TMEM106CQ9BVX2 250 aa23.33■■□□□ 1.33
SREBF1-220ENST00000581707 EPB41L4AQ9HCS5 686 aaPredicted RBP23.33■■□□□ 1.33
SREBF1-220ENST00000581707 FLT3LGP49771 235 aa23.32■■□□□ 1.32
SREBF1-220ENST00000581707 CATSPERGQ6ZRH7 1159 aa23.32■■□□□ 1.32
SREBF1-220ENST00000581707 IFNL3Q8IZI9 196 aa23.32■■□□□ 1.32
SREBF1-220ENST00000581707 GPRC5AQ8NFJ5 357 aa23.32■■□□□ 1.32
SREBF1-220ENST00000581707 GTF3C2Q8WUA4 911 aaPredicted RBP23.32■■□□□ 1.32
SREBF1-220ENST00000581707 NACAP1Q9BZK3 213 aa23.32■■□□□ 1.32
SREBF1-220ENST00000581707 ARHGEF10LQ9HCE6 1279 aa23.32■■□□□ 1.32
SREBF1-220ENST00000581707 TXNRD2Q9NNW7 524 aa23.32■■□□□ 1.32
SREBF1-220ENST00000581707 RBPJLQ9UBG7 517 aa23.32■■□□□ 1.32
SREBF1-220ENST00000581707 TNRC18O15417 2968 aaPredicted RBP23.31■■□□□ 1.32
SREBF1-220ENST00000581707 MYCP01106 439 aaPredicted RBP23.31■■□□□ 1.32
SREBF1-220ENST00000581707 IRX6P78412 446 aaPredicted RBP23.31■■□□□ 1.32
SREBF1-220ENST00000581707 ICA1Q05084 483 aa23.31■■□□□ 1.32
SREBF1-220ENST00000581707 SIAH1Q8IUQ4 282 aa23.31■■□□□ 1.32
SREBF1-220ENST00000581707 STK11IPQ8N1F8 1099 aa23.31■■□□□ 1.32
SREBF1-220ENST00000581707 MKNK2Q9HBH9 465 aa23.31■■□□□ 1.32
SREBF1-220ENST00000581707 RBBP6Q7Z6E9 1792 aaKnown RBP23.3■■□□□ 1.32
SREBF1-220ENST00000581707 PEX10O60683 326 aa23.3■■□□□ 1.32
SREBF1-220ENST00000581707 CLEC10AQ8IUN9 316 aa23.3■■□□□ 1.32
SREBF1-220ENST00000581707 SLAIN1Q8ND83 568 aa23.3■■□□□ 1.32
SREBF1-220ENST00000581707 RPAP3Q9H6T3 665 aaPredicted RBP23.3■■□□□ 1.32
SREBF1-220ENST00000581707 SH2D4AQ9H788 454 aa23.3■■□□□ 1.32
SREBF1-220ENST00000581707 BIN2Q9UBW5 565 aaPredicted RBP23.3■■□□□ 1.32
SREBF1-220ENST00000581707 TMX2Q9Y320 296 aa23.3■■□□□ 1.32
SREBF1-220ENST00000581707 ROBO3Q96MS0 1386 aa23.29■■□□□ 1.32
SREBF1-220ENST00000581707 ADCY3O60266 1144 aa23.29■■□□□ 1.32
SREBF1-220ENST00000581707 IRF5Q13568 498 aa23.29■■□□□ 1.32
SREBF1-220ENST00000581707 PLEKHM2Q8IWE5 1019 aa23.29■■□□□ 1.32
SREBF1-220ENST00000581707 PAGR1Q9BTK6 254 aa23.29■■□□□ 1.32
SREBF1-220ENST00000581707 KANSL2Q9H9L4 492 aa23.29■■□□□ 1.32
SREBF1-220ENST00000581707 TRIM6-TRIM34B2RNG4 842 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 RASA1P20936 1047 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 ERVK-9P63128 1117 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 ERVK-24P63145 666 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 Q3C1V9 767 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 POTEEQ6S8J3 1075 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 CCDC129Q6ZRS4 1044 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 TICAM2Q86XR7 235 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 RABGAP1Q9Y3P9 1069 aa23.28■■□□□ 1.32
SREBF1-220ENST00000581707 BRCA2P51587 3418 aa23.27■■□□□ 1.32
SREBF1-220ENST00000581707 EEF2P13639 858 aaKnown RBP23.27■■□□□ 1.32
SREBF1-220ENST00000581707 EN2P19622 333 aaPredicted RBP23.27■■□□□ 1.32
SREBF1-220ENST00000581707 ATP2B2Q01814 1243 aa23.27■■□□□ 1.32
SREBF1-220ENST00000581707 KIAA1755Q5JYT7 1200 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms