RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ARHGAP39Q9C0H5 1083 aa13.03□□□□□ -0.32
NDEL1-208ENST00000580237 NAPBQ9H115 298 aa13.03□□□□□ -0.32
NDEL1-208ENST00000580237 ASCC2Q9H1I8 757 aaPredicted RBP13.03□□□□□ -0.32
NDEL1-208ENST00000580237 ARHGEF10LQ9HCE6 1279 aa13.03□□□□□ -0.32
NDEL1-208ENST00000580237 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
NDEL1-208ENST00000580237 RBBP6Q7Z6E9 1792 aaKnown RBP13.02□□□□□ -0.32
NDEL1-208ENST00000580237 GSG1L2A8MUP6 293 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 GNRH1P01148 92 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 BCRP11274 1271 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 HOXD10P28358 340 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 GCLCP48506 637 aaPredicted RBP13.02□□□□□ -0.33
NDEL1-208ENST00000580237 CDK8P49336 464 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 SOX10P56693 466 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 ATP2B2Q01814 1243 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 ICA1Q05084 483 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 SEC62Q99442 399 aaKnown RBP13.02□□□□□ -0.33
NDEL1-208ENST00000580237 SH2D4AQ9H788 454 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 EPB41L4AQ9HCS5 686 aaPredicted RBP13.02□□□□□ -0.33
NDEL1-208ENST00000580237 ROBO3Q96MS0 1386 aa13.02□□□□□ -0.33
NDEL1-208ENST00000580237 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
NDEL1-208ENST00000580237 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
NDEL1-208ENST00000580237 AKR1B1P15121 316 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 FAM110CQ1W6H9 321 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 SLC9C1Q4G0N8 1177 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 PLEKHM2Q8IWE5 1019 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 ACER1Q8TDN7 264 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 KIAA1683Q9H0B3 1180 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 PTCH2Q9Y6C5 1203 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 MYPNQ86TC9 1320 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 LAMA4Q16363 1823 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 PARP14Q460N5 1801 aa13.01□□□□□ -0.33
NDEL1-208ENST00000580237 KIAA0100Q14667 2235 aaKnown RBP13.01□□□□□ -0.33
NDEL1-208ENST00000580237 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
NDEL1-208ENST00000580237 SMIM22K7EJ46 135 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 RAD21O60216 631 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 VCAM1P19320 739 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 PRMT2P55345 433 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 CAP1Q01518 475 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 SBK1Q52WX2 424 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
NDEL1-208ENST00000580237 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 RAET1EQ8TD07 263 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 TRIM47Q96LD4 638 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 TANGO6Q9C0B7 1094 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
NDEL1-208ENST00000580237 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
NDEL1-208ENST00000580237 A0A0D9SFI3 127 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 HOXA7P31268 230 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-208ENST00000580237 GUCY1A2P33402 732 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 HERVK_113P62684 666 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 NMIQ13287 307 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-208ENST00000580237 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 GTF3C2Q8WUA4 911 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-208ENST00000580237 C12orf42Q96LP6 360 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 PAGR1Q9BTK6 254 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 OSBPL3Q9H4L5 887 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 SRRDQ9UH36 339 aa12.99□□□□□ -0.33
NDEL1-208ENST00000580237 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-208ENST00000580237 PLXNB2O15031 1838 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 MFAP1P55081 439 aaKnown RBP12.98□□□□□ -0.33
NDEL1-208ENST00000580237 PDE4BQ07343 736 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 PPARAQ07869 468 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 USP17L24Q0WX57 530 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 MCMDC2Q4G0Z9 681 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 COA7Q96BR5 231 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 FAM227BQ96M60 508 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
NDEL1-208ENST00000580237 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 A0A0G2JMZ2 1700 aa12.98□□□□□ -0.33
NDEL1-208ENST00000580237 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 HIP1O00291 1037 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 PRDM1O75626 825 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 MYCP01106 439 aaPredicted RBP12.97□□□□□ -0.33
NDEL1-208ENST00000580237 RASA1P20936 1047 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 CTGFP29279 349 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 PRKCZQ05513 592 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
NDEL1-208ENST00000580237 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
NDEL1-208ENST00000580237 LPAR1Q92633 364 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 P2RX7Q99572 595 aaKnown RBP12.97□□□□□ -0.33
NDEL1-208ENST00000580237 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
NDEL1-208ENST00000580237 BIN2Q9UBW5 565 aaPredicted RBP12.97□□□□□ -0.33
NDEL1-208ENST00000580237 RLFQ13129 1914 aa12.96□□□□□ -0.33
NDEL1-208ENST00000580237 A0A1W2PRG0 241 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms