RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 TMEM87BQ96K49 555 aa18.72■□□□□ 0.59
CSNK1D-212ENST00000580061 TCEANC2Q96MN5 208 aa18.72■□□□□ 0.59
CSNK1D-212ENST00000580061 UBAC1Q9BSL1 405 aa18.72■□□□□ 0.59
CSNK1D-212ENST00000580061 KANSL2Q9H9L4 492 aa18.72■□□□□ 0.59
CSNK1D-212ENST00000580061 PICK1Q9NRD5 415 aa18.72■□□□□ 0.59
CSNK1D-212ENST00000580061 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
CSNK1D-212ENST00000580061 TNKSO95271 1327 aa18.72■□□□□ 0.59
CSNK1D-212ENST00000580061 TMEM88BA6NKF7 163 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 IFIT3O14879 490 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 PTPRAP18433 802 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 ICA1Q05084 483 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 SEC23AQ15436 765 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 CCDC178Q5BJE1 867 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 RCSD1Q6JBY9 416 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 SAPCD2Q86UD0 394 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 CCDC84Q86UT8 332 aaPredicted RBP18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 SIAH1Q8IUQ4 282 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 IGDCC4Q8TDY8 1250 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 TTC14Q96N46 770 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 LRRC2Q9BYS8 371 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
CSNK1D-212ENST00000580061 PTPRFP10586 1907 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 USP17L5A8MUK1 530 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 SH2B2O14492 632 aaPredicted RBP18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 HUNKP57058 714 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 SART3Q15020 963 aaKnown RBP18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 RABEP1Q15276 862 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 PPP4R3BQ5MIZ7 849 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 ENAHQ8N8S7 591 aaPredicted RBP18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 ANKS1AQ92625 1134 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 NYAP2Q9P242 653 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 STX8Q9UNK0 236 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 TLL2Q9Y6L7 1015 aa18.7■□□□□ 0.58
CSNK1D-212ENST00000580061 ERICH2A1L162 156 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 SPDYE5A6NIY4 337 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 TTLL1O95922 423 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 EEF2P13639 858 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 NEK4P51957 841 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 TMEM67Q5HYA8 995 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 Q6ZUG5 572 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 ERO1BQ86YB8 467 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 AGXT2Q9BYV1 514 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 TBC1D2Q9BYX2 928 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 LY9Q9HBG7 655 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 PDRG1Q9NUG6 133 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 ZHX2Q9Y6X8 837 aa18.69■□□□□ 0.58
CSNK1D-212ENST00000580061 APLP1P51693 650 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 PPATQ06203 517 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 WTAPQ15007 396 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 MKL1Q969V6 931 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 SLC10A4Q96EP9 437 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 WDR18Q9BV38 432 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 ALDH8A1Q9H2A2 487 aaPredicted RBP18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 AS3MTQ9HBK9 375 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 ARHGEF10LQ9HCE6 1279 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 CLIP2Q9UDT6 1046 aa18.68■□□□□ 0.58
CSNK1D-212ENST00000580061 A0A1W2PRG0 241 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 LIFRP42702 1097 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 ECE1P42892 770 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 IFIT1BQ5T764 474 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 ZNF280CQ8ND82 737 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 ACER1Q8TDN7 264 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 OPTNQ96CV9 577 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 TMEM47Q9BQJ4 181 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 SENP2Q9HC62 589 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 TMX2Q9Y320 296 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 AFG3L2Q9Y4W6 797 aa18.67■□□□□ 0.58
CSNK1D-212ENST00000580061 TOP1P11387 765 aaKnown RBP18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 FGD1P98174 961 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 PPIL2Q13356 520 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 TOB2Q14106 344 aaPredicted RBP18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 SGMS1Q86VZ5 419 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 TMTC2Q8N394 836 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 IL27Q8NEV9 243 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 OTUD5Q96G74 571 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 HHIPL1Q96JK4 782 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 CREBZFQ9NS37 354 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 ABT1Q9ULW3 272 aaKnown RBP18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 SYNPO2Q9UMS6 1093 aa18.66■□□□□ 0.58
CSNK1D-212ENST00000580061 GJA5P36382 358 aa18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 AK2P54819 239 aa18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 SPP2Q13103 211 aa18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 RGMBQ6NW40 437 aa18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 LRRC47Q8N1G4 583 aaKnown RBP18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 BRF1Q92994 677 aa18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 WNK4Q96J92 1243 aa18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 SH2D4AQ9H788 454 aa18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 KAT14Q9H8E8 782 aa18.65■□□□□ 0.58
CSNK1D-212ENST00000580061 LOC285556D6RIA3 1793 aa18.64■□□□□ 0.57
CSNK1D-212ENST00000580061 USP17L10C9JJH3 530 aa18.64■□□□□ 0.57
CSNK1D-212ENST00000580061 IRF6O14896 467 aa18.64■□□□□ 0.57
CSNK1D-212ENST00000580061 ZNF157P51786 506 aaPredicted RBP18.64■□□□□ 0.57
CSNK1D-212ENST00000580061 BACE1P56817 501 aa18.64■□□□□ 0.57
CSNK1D-212ENST00000580061 ANKRD1Q15327 319 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms