RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 SLC3A2P08195 630 aaKnown RBP20.88■□□□□ 0.93
ITGB4-205ENST00000579211 IRX3P78415 501 aaPredicted RBP20.88■□□□□ 0.93
ITGB4-205ENST00000579211 MCMDC2Q4G0Z9 681 aa20.88■□□□□ 0.93
ITGB4-205ENST00000579211 C17orf99Q6UX52 265 aa20.88■□□□□ 0.93
ITGB4-205ENST00000579211 CCDC129Q6ZRS4 1044 aa20.88■□□□□ 0.93
ITGB4-205ENST00000579211 TMEM179Q6ZVK1 233 aa20.88■□□□□ 0.93
ITGB4-205ENST00000579211 LACTBP83111 547 aaPredicted RBP20.87■□□□□ 0.93
ITGB4-205ENST00000579211 FBXO46Q6PJ61 603 aaPredicted RBP20.87■□□□□ 0.93
ITGB4-205ENST00000579211 OTOP1Q7RTM1 612 aa20.87■□□□□ 0.93
ITGB4-205ENST00000579211 FMNL1O95466 1100 aaPredicted RBP20.86■□□□□ 0.93
ITGB4-205ENST00000579211 NEFLP07196 543 aa20.86■□□□□ 0.93
ITGB4-205ENST00000579211 AKR1B1P15121 316 aa20.86■□□□□ 0.93
ITGB4-205ENST00000579211 MFAP1P55081 439 aaKnown RBP20.86■□□□□ 0.93
ITGB4-205ENST00000579211 ATP2B2Q01814 1243 aa20.86■□□□□ 0.93
ITGB4-205ENST00000579211 NMIQ13287 307 aaPredicted RBP20.86■□□□□ 0.93
ITGB4-205ENST00000579211 ZNF444Q8N0Y2 327 aaPredicted RBP20.86■□□□□ 0.93
ITGB4-205ENST00000579211 ARHGEF10LQ9HCE6 1279 aa20.86■□□□□ 0.93
ITGB4-205ENST00000579211 DIAPH3Q9NSV4 1193 aa20.86■□□□□ 0.93
ITGB4-205ENST00000579211 SMIM22K7EJ46 135 aa20.85■□□□□ 0.93
ITGB4-205ENST00000579211 HIP1O00291 1037 aa20.85■□□□□ 0.93
ITGB4-205ENST00000579211 SDSP20132 328 aa20.85■□□□□ 0.93
ITGB4-205ENST00000579211 ACER1Q8TDN7 264 aa20.85■□□□□ 0.93
ITGB4-205ENST00000579211 FAM227BQ96M60 508 aa20.85■□□□□ 0.93
ITGB4-205ENST00000579211 ASCC2Q9H1I8 757 aaPredicted RBP20.85■□□□□ 0.93
ITGB4-205ENST00000579211 SH2D4AQ9H788 454 aa20.85■□□□□ 0.93
ITGB4-205ENST00000579211 EPB41L4AQ9HCS5 686 aaPredicted RBP20.85■□□□□ 0.93
ITGB4-205ENST00000579211 DOCK3Q8IZD9 2030 aa20.85■□□□□ 0.93
ITGB4-205ENST00000579211 A0A0D9SFI3 127 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 HOXD10P28358 340 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 GUCY1A2P33402 732 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 PSMC4P43686 418 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 GCLCP48506 637 aaPredicted RBP20.84■□□□□ 0.93
ITGB4-205ENST00000579211 ICA1Q05084 483 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 PDE4BQ07343 736 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 ANKRD13CQ8N6S4 541 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 KIAA1683Q9H0B3 1180 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 EMILIN3Q9NT22 766 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 HPS5Q9UPZ3 1129 aa20.84■□□□□ 0.93
ITGB4-205ENST00000579211 ADGRA2Q96PE1 1338 aa20.83■□□□□ 0.93
ITGB4-205ENST00000579211 GNRH1P01148 92 aa20.83■□□□□ 0.93
ITGB4-205ENST00000579211 PDE4AP27815 886 aa20.83■□□□□ 0.93
ITGB4-205ENST00000579211 ARHGAP39Q9C0H5 1083 aa20.83■□□□□ 0.93
ITGB4-205ENST00000579211 PTPN22Q9Y2R2 807 aa20.83■□□□□ 0.93
ITGB4-205ENST00000579211 USP17L15C9J2P7 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 USP17L13C9JLJ4 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 USP17L11C9JVI0 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 USP17L18D6R9N7 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 USP17L22D6RA61 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 USP17L17D6RBQ6 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 USP17L19D6RCP7 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 USP17L20D6RJB6 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 RAD21O60216 631 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 BCRP11274 1271 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 HOXA7P31268 230 aaPredicted RBP20.82■□□□□ 0.92
ITGB4-205ENST00000579211 FCGRTP55899 365 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 PPARAQ07869 468 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 USP17L24Q0WX57 530 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 TTC22Q5TAA0 569 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 CWC27Q6UX04 472 aaKnown RBP20.82■□□□□ 0.92
ITGB4-205ENST00000579211 P2RX7Q99572 595 aaKnown RBP20.82■□□□□ 0.92
ITGB4-205ENST00000579211 KANSL2Q9H9L4 492 aa20.82■□□□□ 0.92
ITGB4-205ENST00000579211 GREB1LQ9C091 1923 aaPredicted RBP20.81■□□□□ 0.92
ITGB4-205ENST00000579211 PRDM1O75626 825 aa20.81■□□□□ 0.92
ITGB4-205ENST00000579211 ROBO3Q96MS0 1386 aa20.81■□□□□ 0.92
ITGB4-205ENST00000579211 CCDC171Q6TFL3 1326 aa20.8■□□□□ 0.92
ITGB4-205ENST00000579211 VPS53Q5VIR6 699 aa20.8■□□□□ 0.92
ITGB4-205ENST00000579211 CCAR1Q8IX12 1150 aaKnown RBP20.8■□□□□ 0.92
ITGB4-205ENST00000579211 C12orf42Q96LP6 360 aa20.8■□□□□ 0.92
ITGB4-205ENST00000579211 A0A1W2PRG0 241 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 CENPBP07199 599 aaPredicted RBP20.79■□□□□ 0.92
ITGB4-205ENST00000579211 TSPY3P0CV98 308 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 TSPY8P0CW00 308 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 EEF2P13639 858 aaKnown RBP20.79■□□□□ 0.92
ITGB4-205ENST00000579211 VCAM1P19320 739 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 RASA1P20936 1047 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 PRMT2P55345 433 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 HERVK_113P62684 666 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 CTDSPL2Q05D32 466 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 FAM110CQ1W6H9 321 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 CENPQQ7L2Z9 268 aaPredicted RBP20.79■□□□□ 0.92
ITGB4-205ENST00000579211 CLEC10AQ8IUN9 316 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 GTF3C2Q8WUA4 911 aaPredicted RBP20.79■□□□□ 0.92
ITGB4-205ENST00000579211 TRIM47Q96LD4 638 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 TANGO6Q9C0B7 1094 aa20.79■□□□□ 0.92
ITGB4-205ENST00000579211 RPAP3Q9H6T3 665 aaPredicted RBP20.79■□□□□ 0.92
ITGB4-205ENST00000579211 TNPO2O14787 897 aaKnown RBP20.78■□□□□ 0.92
ITGB4-205ENST00000579211 HSPD1P10809 573 aaKnown RBP20.78■□□□□ 0.92
ITGB4-205ENST00000579211 CAP1Q01518 475 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 CATSPERGQ6ZRH7 1159 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 NBPF11Q86T75 865 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 RAET1EQ8TD07 263 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 COA7Q96BR5 231 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 CCDC136Q96JN2 1154 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 PAGR1Q9BTK6 254 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 CWC22Q9HCG8 908 aaKnown RBP20.78■□□□□ 0.92
ITGB4-205ENST00000579211 GOPCQ9HD26 462 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 TOMM22Q9NS69 142 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 TMX2Q9Y320 296 aa20.78■□□□□ 0.92
ITGB4-205ENST00000579211 PARP14Q460N5 1801 aa20.77■□□□□ 0.92
ITGB4-205ENST00000579211 ALX1Q15699 326 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms