RNA–Protein interactions for RNA: ENST00000579066.1

CTC1-206, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-206ENST00000579066 DYNLL2Q96FJ2 89 aa13.65□□□□□ -0.22
CTC1-206ENST00000579066 CRNKL1Q9BZJ0 848 aaKnown RBP13.65□□□□□ -0.22
CTC1-206ENST00000579066 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTC1-206ENST00000579066 GINM1Q9NU53 330 aa13.65□□□□□ -0.22
CTC1-206ENST00000579066 PAG1Q9NWQ8 432 aa13.65□□□□□ -0.22
CTC1-206ENST00000579066 MPHOSPH10O00566 681 aaKnown RBP13.64□□□□□ -0.23
CTC1-206ENST00000579066 CNMDO75829 334 aa13.64□□□□□ -0.23
CTC1-206ENST00000579066 MBD4O95243 580 aa13.64□□□□□ -0.23
CTC1-206ENST00000579066 ADD2P35612 726 aa13.64□□□□□ -0.23
CTC1-206ENST00000579066 ERVK-9P63128 1117 aa13.64□□□□□ -0.23
CTC1-206ENST00000579066 ERVK-24P63145 666 aa13.64□□□□□ -0.23
CTC1-206ENST00000579066 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
CTC1-206ENST00000579066 GPRC5AQ8NFJ5 357 aa13.64□□□□□ -0.23
CTC1-206ENST00000579066 DIS3LQ8TF46 1054 aaKnown RBP13.64□□□□□ -0.23
CTC1-206ENST00000579066 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
CTC1-206ENST00000579066 MYH7P12883 1935 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 ALPK3Q96L96 1907 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 A0A1W2PRG0 241 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 ATP5JP18859 108 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 VCAM1P19320 739 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 CCL14Q16627 93 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 TSHZ3Q63HK5 1081 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 C12orf42Q96LP6 360 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 CABP5Q9NP86 173 aa13.63□□□□□ -0.23
CTC1-206ENST00000579066 PAK6Q9NQU5 681 aaPredicted RBP13.63□□□□□ -0.23
CTC1-206ENST00000579066 BRCA2P51587 3418 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L15C9J2P7 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L13C9JLJ4 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L11C9JVI0 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L18D6R9N7 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L22D6RA61 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L17D6RBQ6 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L19D6RCP7 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L20D6RJB6 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 HMGCRP04035 888 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 USP17L24Q0WX57 530 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 KIAA1755Q5JYT7 1200 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 PAWRQ96IZ0 340 aaKnown RBP13.62□□□□□ -0.23
CTC1-206ENST00000579066 HAUS7Q99871 368 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 LRRCC1Q9C099 1032 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 RPAP3Q9H6T3 665 aaPredicted RBP13.62□□□□□ -0.23
CTC1-206ENST00000579066 BTBD7Q9P203 1132 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 PCDH10Q9P2E7 1040 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 MYH8P13535 1937 aa13.62□□□□□ -0.23
CTC1-206ENST00000579066 AKR1B1P15121 316 aa13.61□□□□□ -0.23
CTC1-206ENST00000579066 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
CTC1-206ENST00000579066 WDR78Q5VTH9 848 aa13.61□□□□□ -0.23
CTC1-206ENST00000579066 CATSPERGQ6ZRH7 1159 aa13.61□□□□□ -0.23
CTC1-206ENST00000579066 CCAR1Q8IX12 1150 aaKnown RBP13.61□□□□□ -0.23
CTC1-206ENST00000579066 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
CTC1-206ENST00000579066 HTATIP2Q9BUP3 242 aa13.61□□□□□ -0.23
CTC1-206ENST00000579066 KIAA1683Q9H0B3 1180 aa13.61□□□□□ -0.23
CTC1-206ENST00000579066 HMX1Q9NP08 348 aaPredicted RBP13.61□□□□□ -0.23
CTC1-206ENST00000579066 SPDYE16A6NNV3 312 aaPredicted RBP13.6□□□□□ -0.23
CTC1-206ENST00000579066 MAPK4P31152 587 aa13.6□□□□□ -0.23
CTC1-206ENST00000579066 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.23
CTC1-206ENST00000579066 PLEKHH3Q7Z736 793 aa13.6□□□□□ -0.23
CTC1-206ENST00000579066 STK11IPQ8N1F8 1099 aa13.6□□□□□ -0.23
CTC1-206ENST00000579066 PUS7LQ9H0K6 701 aaKnown RBP13.6□□□□□ -0.23
CTC1-206ENST00000579066 CHMP4BQ9H444 224 aaKnown RBP13.6□□□□□ -0.23
CTC1-206ENST00000579066 CWC22Q9HCG8 908 aaKnown RBP13.6□□□□□ -0.23
CTC1-206ENST00000579066 RPTORQ8N122 1335 aa13.6□□□□□ -0.23
CTC1-206ENST00000579066 MKI67P46013 3256 aaKnown RBP13.59□□□□□ -0.23
CTC1-206ENST00000579066 USP17L12C9JPN9 530 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 USP17L21D6R901 530 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
CTC1-206ENST00000579066 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
CTC1-206ENST00000579066 USP14P54578 494 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 CACNB2Q08289 660 aaPredicted RBP13.59□□□□□ -0.23
CTC1-206ENST00000579066 MORN1Q5T089 497 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
CTC1-206ENST00000579066 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
CTC1-206ENST00000579066 SIAH1Q8IUQ4 282 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 USP6NLQ92738 828 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 FLRT1Q9NZU1 646 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
CTC1-206ENST00000579066 RABGAP1Q9Y3P9 1069 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 SLC4A4Q9Y6R1 1079 aa13.59□□□□□ -0.23
CTC1-206ENST00000579066 ZKSCAN1P17029 563 aaPredicted RBP13.58□□□□□ -0.24
CTC1-206ENST00000579066 CDK8P49336 464 aa13.58□□□□□ -0.24
CTC1-206ENST00000579066 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
CTC1-206ENST00000579066 MAP3K21Q5TCX8 1036 aa13.58□□□□□ -0.24
CTC1-206ENST00000579066 C12orf60Q5U649 245 aa13.58□□□□□ -0.24
CTC1-206ENST00000579066 SPICE1Q8N0Z3 855 aa13.58□□□□□ -0.24
CTC1-206ENST00000579066 SOCS4Q8WXH5 440 aa13.58□□□□□ -0.24
CTC1-206ENST00000579066 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTC1-206ENST00000579066 RLFQ13129 1914 aa13.58□□□□□ -0.24
CTC1-206ENST00000579066 EVI5O60447 810 aa13.57□□□□□ -0.24
CTC1-206ENST00000579066 RGS2P41220 211 aa13.57□□□□□ -0.24
CTC1-206ENST00000579066 ATP2B2Q01814 1243 aa13.57□□□□□ -0.24
CTC1-206ENST00000579066 MAP2K5Q13163 448 aa13.57□□□□□ -0.24
CTC1-206ENST00000579066 UBE3CQ15386 1083 aa13.57□□□□□ -0.24
CTC1-206ENST00000579066 TMEM179Q6ZVK1 233 aa13.57□□□□□ -0.24
CTC1-206ENST00000579066 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
CTC1-206ENST00000579066 GTF3C2Q8WUA4 911 aaPredicted RBP13.57□□□□□ -0.24
CTC1-206ENST00000579066 TANGO6Q9C0B7 1094 aa13.57□□□□□ -0.24
CTC1-206ENST00000579066 DCTPP1Q9H773 170 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms