RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 USP17L5A8MUK1 530 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 GH2P01242 217 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 RBM25P49756 843 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 FGD1P98174 961 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 PPATQ06203 517 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 VGLL4Q14135 290 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 FAM47AQ5JRC9 791 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 LDLRAD1Q5T700 205 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CST9Q5W186 159 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ERO1BQ86YB8 467 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZKSCAN4Q969J2 545 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 KANSL2Q9H9L4 492 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TCP11L1Q9NUJ3 509 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 FZD1Q9UP38 647 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CYP46A1Q9Y6A2 500 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TLL2Q9Y6L7 1015 aa13.27□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SMIM22K7EJ46 135 aa13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 MYH6P13533 1939 aa13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ICA1Q05084 483 aa13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 STOX1Q6ZVD7 989 aa13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 DHX32Q7L7V1 743 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 MB21D2Q8IYB1 491 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 HHIPL1Q96JK4 782 aa13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TMEM87BQ96K49 555 aa13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ELP3Q9H9T3 547 aa13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZSWIM5Q9P217 1185 aa13.26□□□□□ -0.29
CDK5RAP3-210ENST00000578733 LOC285556D6RIA3 1793 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TTLL1O95922 423 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SLURP2P0DP57 97 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ATP2B2Q01814 1243 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SEPT2Q15019 361 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CYP4F22Q6NT55 531 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 RGMBQ6NW40 437 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SAPCD2Q86UD0 394 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TTC14Q96N46 770 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TBC1D32Q96NH3 1257 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZSCAN10Q96SZ4 725 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 FEZ1Q99689 392 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 INCENPQ9NQS7 918 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 STX8Q9UNK0 236 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SNCAIPQ9Y6H5 919 aa13.25□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TNKSO95271 1327 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SPDYE5A6NIY4 337 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 IFIT3O14879 490 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 PRC1O43663 620 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZBTB48P10074 688 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 PTPRAP18433 802 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 RPS6KB1P23443 525 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 USP14P54578 494 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 PPIL2Q13356 520 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 WTAPQ15007 396 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 IFIT1BQ5T764 474 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 DGKHQ86XP1 1220 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 WDR18Q9BV38 432 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 MCOLN1Q9GZU1 580 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 NYAP2Q9P242 653 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SYNPO2Q9UMS6 1093 aa13.24□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TNRC18O15417 2968 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 C19orf81C9J6K1 198 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TOP1P11387 765 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 GRM1Q13255 1194 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 RRP1BQ14684 758 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 RABEP1Q15276 862 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ANKRD1Q15327 319 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TMEM67Q5HYA8 995 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZNF280CQ8ND82 737 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 OPTNQ96CV9 577 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CLMNQ96JQ2 1002 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 KAT14Q9H8E8 782 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 GOPCQ9HD26 462 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TACC3Q9Y6A5 838 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TAF6LQ9Y6J9 622 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZHX2Q9Y6X8 837 aa13.23□□□□□ -0.29
CDK5RAP3-210ENST00000578733 IGKV6D-41A0A0C4DH26 115 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CCDC69A6NI79 296 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 USP17L10C9JJH3 530 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CXCL11O14625 94 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ST18O60284 1047 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 EEF2P13639 858 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CYB5R4Q7L1T6 521 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ZKSCAN3Q9BRR0 538 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 PDRG1Q9NUG6 133 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TMOD4Q9NZQ9 345 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms