RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 TTYH1Q9H313 450 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-217ENST00000577897 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
SREBF1-217ENST00000577897 AKAP2Q9Y2D5 859 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 RFX7Q2KHR2 1363 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 CHMLP26374 656 aa16.74■□□□□ 0.27
SREBF1-217ENST00000577897 RFX5P48382 616 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-217ENST00000577897 IRX3P78415 501 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-217ENST00000577897 MAP3K10Q02779 954 aa16.74■□□□□ 0.27
SREBF1-217ENST00000577897 C9orf50Q5SZB4 431 aa16.74■□□□□ 0.27
SREBF1-217ENST00000577897 PI4K2BQ8TCG2 481 aa16.74■□□□□ 0.27
SREBF1-217ENST00000577897 LPIN2Q92539 896 aa16.74■□□□□ 0.27
SREBF1-217ENST00000577897 USP26Q9BXU7 913 aa16.74■□□□□ 0.27
SREBF1-217ENST00000577897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.74■□□□□ 0.27
SREBF1-217ENST00000577897 MORF4L1Q9UBU8 362 aa16.74■□□□□ 0.27
SREBF1-217ENST00000577897 PIEZO1Q92508 2521 aa16.74■□□□□ 0.27
SREBF1-217ENST00000577897 LTBP2Q14767 1821 aa16.73■□□□□ 0.27
SREBF1-217ENST00000577897 FRMPD3Q5JV73 1810 aa16.73■□□□□ 0.27
SREBF1-217ENST00000577897 XRCC5P13010 732 aaKnown RBP16.73■□□□□ 0.27
SREBF1-217ENST00000577897 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
SREBF1-217ENST00000577897 TRMT44Q8IYL2 757 aaKnown RBP16.73■□□□□ 0.27
SREBF1-217ENST00000577897 ESYT1Q9BSJ8 1104 aa16.73■□□□□ 0.27
SREBF1-217ENST00000577897 PRDM5Q9NQX1 630 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-217ENST00000577897 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
SREBF1-217ENST00000577897 MYH2Q9UKX2 1941 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 EYA2O00167 538 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 RGS2P41220 211 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 RTP1P59025 263 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 MAP3K12Q12852 859 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
SREBF1-217ENST00000577897 TNNI3KQ59H18 835 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 DZIP1Q86YF9 867 aaKnown RBP16.72■□□□□ 0.27
SREBF1-217ENST00000577897 CWC22Q9HCG8 908 aaKnown RBP16.72■□□□□ 0.27
SREBF1-217ENST00000577897 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 ATP11BQ9Y2G3 1177 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 FPGT-TNNI3KV9GXZ4 949 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 ATAD5Q96QE3 1844 aa16.72■□□□□ 0.27
SREBF1-217ENST00000577897 ST18O60284 1047 aa16.71■□□□□ 0.27
SREBF1-217ENST00000577897 BTDP43251 543 aa16.71■□□□□ 0.27
SREBF1-217ENST00000577897 ANAPC15P60006 121 aa16.71■□□□□ 0.27
SREBF1-217ENST00000577897 GPRC5AQ8NFJ5 357 aa16.71■□□□□ 0.27
SREBF1-217ENST00000577897 EAF2Q96CJ1 260 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-217ENST00000577897 OSBPL5Q9H0X9 879 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-217ENST00000577897 TXNRD2Q9NNW7 524 aa16.71■□□□□ 0.27
SREBF1-217ENST00000577897 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
SREBF1-217ENST00000577897 GAKO14976 1311 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 ATP5JP18859 108 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 CNGA1P29973 690 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 MAPK4P31152 587 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 SMAD3P84022 425 aaKnown RBP16.7■□□□□ 0.26
SREBF1-217ENST00000577897 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 P2RX7Q99572 595 aaKnown RBP16.7■□□□□ 0.26
SREBF1-217ENST00000577897 APBA2Q99767 749 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 PAGR1Q9BTK6 254 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-217ENST00000577897 SALL1Q9NSC2 1324 aa16.7■□□□□ 0.26
SREBF1-217ENST00000577897 USP17L5A8MUK1 530 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 HERVK_113P62684 666 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 TFCP2Q12800 502 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 MTMR2Q13614 643 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 SH3D19Q5HYK7 790 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 GPR142Q7Z601 462 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 BADQ92934 168 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 TBC1D2Q9BYX2 928 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 PORCNQ9H237 461 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 AS3MTQ9HBK9 375 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 TMOD4Q9NZQ9 345 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 ABCF2Q9UG63 623 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 DENND2AQ9ULE3 1009 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 RAD50Q92878 1312 aa16.69■□□□□ 0.26
SREBF1-217ENST00000577897 TBC1D12O60347 775 aa16.68■□□□□ 0.26
SREBF1-217ENST00000577897 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
SREBF1-217ENST00000577897 MCM2P49736 904 aa16.68■□□□□ 0.26
SREBF1-217ENST00000577897 ATP2B3Q16720 1220 aa16.68■□□□□ 0.26
SREBF1-217ENST00000577897 PLEKHH3Q7Z736 793 aa16.68■□□□□ 0.26
SREBF1-217ENST00000577897 USP6NLQ92738 828 aa16.68■□□□□ 0.26
SREBF1-217ENST00000577897 DDX20Q9UHI6 824 aaKnown RBP16.68■□□□□ 0.26
SREBF1-217ENST00000577897 CAP2P40123 477 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 PHKA1P46020 1223 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 ERVK-24P63145 666 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 RRP1BQ14684 758 aaKnown RBP16.67■□□□□ 0.26
SREBF1-217ENST00000577897 Q3C1V9 767 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 CCDC158Q5M9N0 1113 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 MORN1Q5T089 497 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 MFSD14CQ5VZR4 134 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 SLF2Q8IX21 1173 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 ZGPATQ8N5A5 531 aaKnown RBP16.67■□□□□ 0.26
SREBF1-217ENST00000577897 NDUFB9Q9Y6M9 179 aa16.67■□□□□ 0.26
SREBF1-217ENST00000577897 DNM1LO00429 736 aa16.66■□□□□ 0.26
SREBF1-217ENST00000577897 WDR78Q5VTH9 848 aa16.66■□□□□ 0.26
SREBF1-217ENST00000577897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.66■□□□□ 0.26
SREBF1-217ENST00000577897 LPAR1Q92633 364 aa16.66■□□□□ 0.26
SREBF1-217ENST00000577897 NEUROD6Q96NK8 337 aa16.66■□□□□ 0.26
SREBF1-217ENST00000577897 FSD1Q9BTV5 496 aa16.66■□□□□ 0.26
SREBF1-217ENST00000577897 RBPJLQ9UBG7 517 aa16.66■□□□□ 0.26
SREBF1-217ENST00000577897 MROH7-TTC4A0A0A0MT08 1334 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms