RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 SH2D4AQ9H788 454 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 ZNF287Q9HBT7 754 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 EPB41L4AQ9HCS5 686 aaPredicted RBP11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 TOMM22Q9NS69 142 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 MYH1P12882 1939 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 FOCADQ5VW36 1801 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 A0A0D9SFI3 127 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 PRDM1O75626 825 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 MYCP01106 439 aaPredicted RBP11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 MFAP1P55081 439 aaKnown RBP11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 FCGRTP55899 365 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 MCMDC2Q4G0Z9 681 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 SH3D19Q5HYK7 790 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 CWC27Q6UX04 472 aaKnown RBP11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 C17orf99Q6UX52 265 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 IFNL3Q8IZI9 196 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 ZNF444Q8N0Y2 327 aaPredicted RBP11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 PAGR1Q9BTK6 254 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 TANGO6Q9C0B7 1094 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 HELLSQ9NRZ9 838 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 SLC45A1Q9Y2W3 748 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 CDK5RAP2Q96SN8 1893 aa11.01□□□□□ -0.65
CDKN2A-211ENST00000577854 SIPA1L1O43166 1804 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 SDSP20132 328 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 HOXD10P28358 340 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 PDE4BQ07343 736 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 PPARAQ07869 468 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 SBK1Q52WX2 424 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 RAET1EQ8TD07 263 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 KIAA1683Q9H0B3 1180 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
CDKN2A-211ENST00000577854 BIN2Q9UBW5 565 aaPredicted RBP11□□□□□ -0.65
CDKN2A-211ENST00000577854 MYH7P12883 1935 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 DDX60LQ5H9U9 1706 aaKnown RBP10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L15C9J2P7 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L13C9JLJ4 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L11C9JVI0 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L18D6R9N7 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L22D6RA61 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L17D6RBQ6 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L19D6RCP7 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L20D6RJB6 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 HIP1O00291 1037 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 TNPO2O14787 897 aaKnown RBP10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 CENPBP07199 599 aaPredicted RBP10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 TSPY3P0CV98 308 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 TSPY8P0CW00 308 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 VCAM1P19320 739 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 PDE4AP27815 886 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 GUCY1A2P33402 732 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 GCLCP48506 637 aaPredicted RBP10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 SOX10P56693 466 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 CTDSPL2Q05D32 466 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 USP17L24Q0WX57 530 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 SLC9C1Q4G0N8 1177 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 RRP12Q5JTH9 1297 aaKnown RBP10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 TTC22Q5TAA0 569 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 VPS53Q5VIR6 699 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 WDR78Q5VTH9 848 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 SPICE1Q8N0Z3 855 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 CCDC136Q96JN2 1154 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 RPAP3Q9H6T3 665 aaPredicted RBP10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 PTCH2Q9Y6C5 1203 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 ATAD5Q96QE3 1844 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 CCDC171Q6TFL3 1326 aa10.99□□□□□ -0.65
CDKN2A-211ENST00000577854 RANBP6O60518 1105 aaKnown RBP10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 BCRP11274 1271 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 EEF2P13639 858 aaKnown RBP10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 RASA1P20936 1047 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 HERVK_113P62684 666 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 FAM110CQ1W6H9 321 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 NBPF11Q86T75 865 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 ZNF589Q86UQ0 364 aaPredicted RBP10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 COA7Q96BR5 231 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 TRIM47Q96LD4 638 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 P2RX7Q99572 595 aaKnown RBP10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 KANSL2Q9H9L4 492 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 MYPNQ86TC9 1320 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 ADGRA2Q96PE1 1338 aa10.98□□□□□ -0.65
CDKN2A-211ENST00000577854 A0A1W2PRG0 241 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 TSPY2A6NKD2 308 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 GNRH1P01148 92 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 HOXA7P31268 230 aaPredicted RBP10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 HAND2P61296 217 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 CAP1Q01518 475 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 PRKCZQ05513 592 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 FAM47AQ5JRC9 791 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 CENPQQ7L2Z9 268 aaPredicted RBP10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 GPRC5AQ8NFJ5 357 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 CHMP4CQ96CF2 233 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 MTMR7Q9Y216 660 aa10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 LAMB1P07942 1786 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms