RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ZNF287Q9HBT7 754 aa28.06■■■□□ 2.08
SNF8-217ENST00000576353 SDSP20132 328 aa28.05■■■□□ 2.08
SNF8-217ENST00000576353 HOXA7P31268 230 aaPredicted RBP28.05■■■□□ 2.08
SNF8-217ENST00000576353 MKNK2Q9HBH9 465 aa28.05■■■□□ 2.08
SNF8-217ENST00000576353 EMILIN3Q9NT22 766 aa28.05■■■□□ 2.08
SNF8-217ENST00000576353 CAPN15O75808 1086 aa28.04■■■□□ 2.08
SNF8-217ENST00000576353 BCRP11274 1271 aa28.04■■■□□ 2.08
SNF8-217ENST00000576353 AKR1B1P15121 316 aa28.04■■■□□ 2.08
SNF8-217ENST00000576353 NMIQ13287 307 aaPredicted RBP28.04■■■□□ 2.08
SNF8-217ENST00000576353 BAZ2AQ9UIF9 1905 aaKnown RBP28.04■■■□□ 2.08
SNF8-217ENST00000576353 ROBO3Q96MS0 1386 aa28.03■■■□□ 2.08
SNF8-217ENST00000576353 PTPRFP10586 1907 aa28.03■■■□□ 2.08
SNF8-217ENST00000576353 A0A0D9SFI3 127 aa28.03■■■□□ 2.08
SNF8-217ENST00000576353 HIP1O00291 1037 aa28.03■■■□□ 2.08
SNF8-217ENST00000576353 SLC3A2P08195 630 aaKnown RBP28.03■■■□□ 2.08
SNF8-217ENST00000576353 IRX3P78415 501 aaPredicted RBP28.03■■■□□ 2.08
SNF8-217ENST00000576353 ACER1Q8TDN7 264 aa28.03■■■□□ 2.08
SNF8-217ENST00000576353 C12orf42Q96LP6 360 aa28.03■■■□□ 2.08
SNF8-217ENST00000576353 ASCC2Q9H1I8 757 aaPredicted RBP28.03■■■□□ 2.08
SNF8-217ENST00000576353 GNRH1P01148 92 aa28.02■■■□□ 2.08
SNF8-217ENST00000576353 GCLCP48506 637 aaPredicted RBP28.02■■■□□ 2.08
SNF8-217ENST00000576353 ZYXQ15942 572 aaKnown RBP28.02■■■□□ 2.08
SNF8-217ENST00000576353 MFAP1P55081 439 aaKnown RBP28.01■■■□□ 2.07
SNF8-217ENST00000576353 TTC22Q5TAA0 569 aa28.01■■■□□ 2.07
SNF8-217ENST00000576353 STK11IPQ8N1F8 1099 aa28.01■■■□□ 2.07
SNF8-217ENST00000576353 KANSL2Q9H9L4 492 aa28.01■■■□□ 2.07
SNF8-217ENST00000576353 ARHGEF10LQ9HCE6 1279 aa28.01■■■□□ 2.07
SNF8-217ENST00000576353 DIAPH3Q9NSV4 1193 aa28.01■■■□□ 2.07
SNF8-217ENST00000576353 ICA1Q05084 483 aa28■■■□□ 2.07
SNF8-217ENST00000576353 PPARAQ07869 468 aa28■■■□□ 2.07
SNF8-217ENST00000576353 SH2D4AQ9H788 454 aa28■■■□□ 2.07
SNF8-217ENST00000576353 HPS5Q9UPZ3 1129 aa28■■■□□ 2.07
SNF8-217ENST00000576353 PTPN22Q9Y2R2 807 aa28■■■□□ 2.07
SNF8-217ENST00000576353 LOC285556D6RIA3 1793 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 CCDC85CA6NKD9 419 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 FOXP2O15409 715 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 RASA1P20936 1047 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 PSMC4P43686 418 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 CAP1Q01518 475 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 PDE4BQ07343 736 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 ALX1Q15699 326 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 VPS53Q5VIR6 699 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 ZNF444Q8N0Y2 327 aaPredicted RBP27.99■■■□□ 2.07
SNF8-217ENST00000576353 ARHGAP39Q9C0H5 1083 aa27.99■■■□□ 2.07
SNF8-217ENST00000576353 CCDC171Q6TFL3 1326 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 A0A1W2PRG0 241 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L15C9J2P7 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L13C9JLJ4 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L11C9JVI0 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L18D6R9N7 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L22D6RA61 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L17D6RBQ6 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L19D6RCP7 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L20D6RJB6 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 HOXD10P28358 340 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 USP17L24Q0WX57 530 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 CENPQQ7L2Z9 268 aaPredicted RBP27.98■■■□□ 2.07
SNF8-217ENST00000576353 ANKRD13CQ8N6S4 541 aa27.98■■■□□ 2.07
SNF8-217ENST00000576353 FMNL1O95466 1100 aaPredicted RBP27.97■■■□□ 2.07
SNF8-217ENST00000576353 VCAM1P19320 739 aa27.97■■■□□ 2.07
SNF8-217ENST00000576353 PRMT2P55345 433 aa27.97■■■□□ 2.07
SNF8-217ENST00000576353 FAM110CQ1W6H9 321 aa27.97■■■□□ 2.07
SNF8-217ENST00000576353 SIAH1Q8IUQ4 282 aa27.97■■■□□ 2.07
SNF8-217ENST00000576353 P2RX7Q99572 595 aaKnown RBP27.97■■■□□ 2.07
SNF8-217ENST00000576353 TMX2Q9Y320 296 aa27.97■■■□□ 2.07
SNF8-217ENST00000576353 HSPD1P10809 573 aaKnown RBP27.96■■■□□ 2.07
SNF8-217ENST00000576353 FCGRTP55899 365 aa27.96■■■□□ 2.07
SNF8-217ENST00000576353 CWC27Q6UX04 472 aaKnown RBP27.96■■■□□ 2.07
SNF8-217ENST00000576353 ZNF589Q86UQ0 364 aaPredicted RBP27.96■■■□□ 2.07
SNF8-217ENST00000576353 GTF3C2Q8WUA4 911 aaPredicted RBP27.96■■■□□ 2.07
SNF8-217ENST00000576353 TRIM47Q96LD4 638 aa27.96■■■□□ 2.07
SNF8-217ENST00000576353 NEFLP07196 543 aa27.95■■■□□ 2.06
SNF8-217ENST00000576353 GSPT1P15170 499 aaKnown RBP27.95■■■□□ 2.06
SNF8-217ENST00000576353 HERVK_113P62684 666 aa27.95■■■□□ 2.06
SNF8-217ENST00000576353 CLEC10AQ8IUN9 316 aa27.95■■■□□ 2.06
SNF8-217ENST00000576353 PRDM1O75626 825 aa27.94■■■□□ 2.06
SNF8-217ENST00000576353 ECM2O94769 699 aaPredicted RBP27.94■■■□□ 2.06
SNF8-217ENST00000576353 FGAP02671 866 aa27.94■■■□□ 2.06
SNF8-217ENST00000576353 EEF2P13639 858 aaKnown RBP27.94■■■□□ 2.06
SNF8-217ENST00000576353 ATP2B2Q01814 1243 aa27.94■■■□□ 2.06
SNF8-217ENST00000576353 CATSPERGQ6ZRH7 1159 aa27.94■■■□□ 2.06
SNF8-217ENST00000576353 LPAR1Q92633 364 aa27.94■■■□□ 2.06
SNF8-217ENST00000576353 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.94■■■□□ 2.06
SNF8-217ENST00000576353 ANAPC4Q9UJX5 808 aa27.94■■■□□ 2.06
SNF8-217ENST00000576353 CTGFP29279 349 aa27.93■■■□□ 2.06
SNF8-217ENST00000576353 RPAP3Q9H6T3 665 aaPredicted RBP27.93■■■□□ 2.06
SNF8-217ENST00000576353 MORF4L1Q9UBU8 362 aa27.93■■■□□ 2.06
SNF8-217ENST00000576353 ZMYM6O95789 1325 aa27.92■■■□□ 2.06
SNF8-217ENST00000576353 VCPKMTQ9H867 229 aa27.92■■■□□ 2.06
SNF8-217ENST00000576353 SRRDQ9UH36 339 aa27.92■■■□□ 2.06
SNF8-217ENST00000576353 GPRC5AQ8NFJ5 357 aa27.91■■■□□ 2.06
SNF8-217ENST00000576353 NYAP2Q9P242 653 aa27.91■■■□□ 2.06
SNF8-217ENST00000576353 TSPY3P0CV98 308 aa27.9■■■□□ 2.06
SNF8-217ENST00000576353 TSPY8P0CW00 308 aa27.9■■■□□ 2.06
SNF8-217ENST00000576353 CTDSPL2Q05D32 466 aa27.9■■■□□ 2.06
SNF8-217ENST00000576353 NEDD1Q8NHV4 660 aa27.9■■■□□ 2.06
SNF8-217ENST00000576353 GOPCQ9HD26 462 aa27.9■■■□□ 2.06
SNF8-217ENST00000576353 PTCH2Q9Y6C5 1203 aa27.9■■■□□ 2.06
SNF8-217ENST00000576353 TNPO2O14787 897 aaKnown RBP27.89■■■□□ 2.06
SNF8-217ENST00000576353 CENPBP07199 599 aaPredicted RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms