RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 STRBPQ96SI9 672 aaKnown RBP20.88■□□□□ 0.93
SMG6-212ENST00000573153 VCAM1P19320 739 aa20.87■□□□□ 0.93
SMG6-212ENST00000573153 HDAC1Q13547 482 aaPredicted RBP20.87■□□□□ 0.93
SMG6-212ENST00000573153 Q3C1V9 767 aa20.87■□□□□ 0.93
SMG6-212ENST00000573153 CTR9Q6PD62 1173 aa20.87■□□□□ 0.93
SMG6-212ENST00000573153 NBPF11Q86T75 865 aa20.87■□□□□ 0.93
SMG6-212ENST00000573153 CLEC10AQ8IUN9 316 aa20.87■□□□□ 0.93
SMG6-212ENST00000573153 RAET1EQ8TD07 263 aa20.87■□□□□ 0.93
SMG6-212ENST00000573153 EPB41L4AQ9HCS5 686 aaPredicted RBP20.87■□□□□ 0.93
SMG6-212ENST00000573153 TMOD4Q9NZQ9 345 aa20.87■□□□□ 0.93
SMG6-212ENST00000573153 TAOK2Q9UL54 1235 aa20.87■□□□□ 0.93
SMG6-212ENST00000573153 GSG1L2A8MUP6 293 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 USP17L12C9JPN9 530 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 USP17L21D6R901 530 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 TNPO2O14787 897 aaKnown RBP20.86■□□□□ 0.93
SMG6-212ENST00000573153 MYCP01106 439 aaPredicted RBP20.86■□□□□ 0.93
SMG6-212ENST00000573153 AKR1B1P15121 316 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 RAB3GAP1Q15042 981 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 C16orf86Q6ZW13 317 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 PXYLP1Q8TE99 480 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 APPBP2Q92624 585 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 MYH8P13535 1937 aa20.86■□□□□ 0.93
SMG6-212ENST00000573153 ROBO3Q96MS0 1386 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 M0R2C6 588 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 ELNP15502 786 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 ZYXQ15942 572 aaKnown RBP20.85■□□□□ 0.93
SMG6-212ENST00000573153 UBE2Q1Q7Z7E8 422 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 SLAIN1Q8ND83 568 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 GPATCH3Q96I76 525 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMG6-212ENST00000573153 SWAP70Q9UH65 585 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 SLC4A4Q9Y6R1 1079 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 PARP14Q460N5 1801 aa20.85■□□□□ 0.93
SMG6-212ENST00000573153 FOXP2O15409 715 aa20.84■□□□□ 0.93
SMG6-212ENST00000573153 RNF113AO15541 343 aaKnown RBP20.84■□□□□ 0.93
SMG6-212ENST00000573153 ADCY3O60266 1144 aa20.84■□□□□ 0.93
SMG6-212ENST00000573153 CDK8P49336 464 aa20.84■□□□□ 0.93
SMG6-212ENST00000573153 IRX3P78415 501 aaPredicted RBP20.84■□□□□ 0.93
SMG6-212ENST00000573153 ZSCAN25Q6NSZ9 544 aa20.84■□□□□ 0.93
SMG6-212ENST00000573153 LBX2Q6XYB7 198 aa20.84■□□□□ 0.93
SMG6-212ENST00000573153 CATSPERGQ6ZRH7 1159 aa20.84■□□□□ 0.93
SMG6-212ENST00000573153 PORCNQ9H237 461 aa20.84■□□□□ 0.93
SMG6-212ENST00000573153 CCL5P13501 91 aa20.83■□□□□ 0.93
SMG6-212ENST00000573153 USP6NLQ92738 828 aa20.83■□□□□ 0.93
SMG6-212ENST00000573153 TMEM106CQ9BVX2 250 aa20.83■□□□□ 0.93
SMG6-212ENST00000573153 UNC93B1Q9H1C4 597 aa20.83■□□□□ 0.93
SMG6-212ENST00000573153 SPDYE16A6NNV3 312 aaPredicted RBP20.82■□□□□ 0.92
SMG6-212ENST00000573153 GPAA1O43292 621 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 MX1P20591 662 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 USP14P54578 494 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 ERVK-9P63128 1117 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 ERVK-24P63145 666 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 SBK1Q52WX2 424 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 PRPF38BQ5VTL8 546 aaKnown RBP20.82■□□□□ 0.92
SMG6-212ENST00000573153 TMEM179Q6ZVK1 233 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 SEC62Q99442 399 aaKnown RBP20.82■□□□□ 0.92
SMG6-212ENST00000573153 FEZ1Q99689 392 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 CABP5Q9NP86 173 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 STAP2Q9UGK3 403 aa20.82■□□□□ 0.92
SMG6-212ENST00000573153 USP17L15C9J2P7 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 USP17L13C9JLJ4 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 USP17L11C9JVI0 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 USP17L18D6R9N7 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 USP17L22D6RA61 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 USP17L17D6RBQ6 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 USP17L19D6RCP7 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 USP17L20D6RJB6 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 GLRX3O76003 335 aaKnown RBP20.81■□□□□ 0.92
SMG6-212ENST00000573153 INHAP05111 366 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 GJB1P08034 283 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 GJA8P48165 433 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 USP17L24Q0WX57 530 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 GCC1Q96CN9 775 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 BTBD7Q9P203 1132 aa20.81■□□□□ 0.92
SMG6-212ENST00000573153 ZFYP08048 801 aaPredicted RBP20.8■□□□□ 0.92
SMG6-212ENST00000573153 TRIM32Q13049 653 aa20.8■□□□□ 0.92
SMG6-212ENST00000573153 ZMYM1Q5SVZ6 1142 aa20.8■□□□□ 0.92
SMG6-212ENST00000573153 GIMAP6Q6P9H5 292 aa20.8■□□□□ 0.92
SMG6-212ENST00000573153 GPRC5AQ8NFJ5 357 aa20.8■□□□□ 0.92
SMG6-212ENST00000573153 COA7Q96BR5 231 aa20.8■□□□□ 0.92
SMG6-212ENST00000573153 RPAP3Q9H6T3 665 aaPredicted RBP20.8■□□□□ 0.92
SMG6-212ENST00000573153 PAK6Q9NQU5 681 aaPredicted RBP20.8■□□□□ 0.92
SMG6-212ENST00000573153 ARPP21Q9UBL0 812 aaPredicted RBP20.8■□□□□ 0.92
SMG6-212ENST00000573153 TMX2Q9Y320 296 aa20.8■□□□□ 0.92
SMG6-212ENST00000573153 MORN1Q5T089 497 aa20.79■□□□□ 0.92
SMG6-212ENST00000573153 SMC5Q8IY18 1101 aa20.79■□□□□ 0.92
SMG6-212ENST00000573153 GTF3C2Q8WUA4 911 aaPredicted RBP20.79■□□□□ 0.92
SMG6-212ENST00000573153 TRIB2Q92519 343 aa20.79■□□□□ 0.92
SMG6-212ENST00000573153 RABGAP1Q9Y3P9 1069 aa20.79■□□□□ 0.92
SMG6-212ENST00000573153 MPHOSPH10O00566 681 aaKnown RBP20.78■□□□□ 0.92
SMG6-212ENST00000573153 ERC2O15083 957 aa20.78■□□□□ 0.92
SMG6-212ENST00000573153 RASA1P20936 1047 aa20.78■□□□□ 0.92
SMG6-212ENST00000573153 MAP3K21Q5TCX8 1036 aa20.78■□□□□ 0.92
SMG6-212ENST00000573153 ANKRD45Q5TZF3 282 aa20.78■□□□□ 0.92
SMG6-212ENST00000573153 CCDC17Q96LX7 622 aa20.78■□□□□ 0.92
SMG6-212ENST00000573153 IGKV6D-41A0A0C4DH26 115 aa20.77■□□□□ 0.92
SMG6-212ENST00000573153 IGHA2P01877 340 aa20.77■□□□□ 0.92
SMG6-212ENST00000573153 IGHDP01880 384 aa20.77■□□□□ 0.92
SMG6-212ENST00000573153 PDE1AP54750 535 aa20.77■□□□□ 0.92
SMG6-212ENST00000573153 UBXN2AP68543 259 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms