RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 USP17L2Q6R6M4 530 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 TMEM179Q6ZVK1 233 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 OTOP1Q7RTM1 612 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 ACER1Q8TDN7 264 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 MKNK2Q9HBH9 465 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 ARHGEF6Q15052 776 aa24.68■■□□□ 1.54
CHMP6-204ENST00000572778 EMILIN3Q9NT22 766 aa24.68■■□□□ 1.54
CHMP6-204ENST00000572778 BAZ2AQ9UIF9 1905 aaKnown RBP24.67■■□□□ 1.54
CHMP6-204ENST00000572778 LACTBP83111 547 aaPredicted RBP24.67■■□□□ 1.54
CHMP6-204ENST00000572778 VPS53Q5VIR6 699 aa24.67■■□□□ 1.54
CHMP6-204ENST00000572778 ASCC2Q9H1I8 757 aaPredicted RBP24.67■■□□□ 1.54
CHMP6-204ENST00000572778 USP14P54578 494 aa24.66■■□□□ 1.54
CHMP6-204ENST00000572778 IRX3P78415 501 aaPredicted RBP24.66■■□□□ 1.54
CHMP6-204ENST00000572778 CAP1Q01518 475 aa24.66■■□□□ 1.54
CHMP6-204ENST00000572778 ARHGAP39Q9C0H5 1083 aa24.66■■□□□ 1.54
CHMP6-204ENST00000572778 KIAA1683Q9H0B3 1180 aa24.66■■□□□ 1.54
CHMP6-204ENST00000572778 DIAPH3Q9NSV4 1193 aa24.66■■□□□ 1.54
CHMP6-204ENST00000572778 BCRP11274 1271 aa24.65■■□□□ 1.54
CHMP6-204ENST00000572778 TTC22Q5TAA0 569 aa24.65■■□□□ 1.54
CHMP6-204ENST00000572778 FBXO46Q6PJ61 603 aaPredicted RBP24.65■■□□□ 1.54
CHMP6-204ENST00000572778 CLEC10AQ8IUN9 316 aa24.65■■□□□ 1.54
CHMP6-204ENST00000572778 ZNF287Q9HBT7 754 aa24.65■■□□□ 1.54
CHMP6-204ENST00000572778 ROBO3Q96MS0 1386 aa24.65■■□□□ 1.54
CHMP6-204ENST00000572778 CCDC85CA6NKD9 419 aa24.64■■□□□ 1.54
CHMP6-204ENST00000572778 FOXP2O15409 715 aa24.64■■□□□ 1.54
CHMP6-204ENST00000572778 SLC3A2P08195 630 aaKnown RBP24.64■■□□□ 1.54
CHMP6-204ENST00000572778 HOXA7P31268 230 aaPredicted RBP24.64■■□□□ 1.54
CHMP6-204ENST00000572778 ICA1Q05084 483 aa24.64■■□□□ 1.54
CHMP6-204ENST00000572778 PPARAQ07869 468 aa24.64■■□□□ 1.54
CHMP6-204ENST00000572778 ZNF589Q86UQ0 364 aaPredicted RBP24.64■■□□□ 1.54
CHMP6-204ENST00000572778 C12orf42Q96LP6 360 aa24.64■■□□□ 1.54
CHMP6-204ENST00000572778 PTPRFP10586 1907 aa24.63■■□□□ 1.53
CHMP6-204ENST00000572778 A0A1W2PRG0 241 aa24.63■■□□□ 1.53
CHMP6-204ENST00000572778 HIP1O00291 1037 aa24.63■■□□□ 1.53
CHMP6-204ENST00000572778 PRDM1O75626 825 aa24.63■■□□□ 1.53
CHMP6-204ENST00000572778 GSPT1P15170 499 aaKnown RBP24.63■■□□□ 1.53
CHMP6-204ENST00000572778 RASA1P20936 1047 aa24.63■■□□□ 1.53
CHMP6-204ENST00000572778 ATP2B2Q01814 1243 aa24.63■■□□□ 1.53
CHMP6-204ENST00000572778 CWC27Q6UX04 472 aaKnown RBP24.63■■□□□ 1.53
CHMP6-204ENST00000572778 ZNF444Q8N0Y2 327 aaPredicted RBP24.63■■□□□ 1.53
CHMP6-204ENST00000572778 ARHGEF10LQ9HCE6 1279 aa24.63■■□□□ 1.53
CHMP6-204ENST00000572778 HPS5Q9UPZ3 1129 aa24.63■■□□□ 1.53
CHMP6-204ENST00000572778 CCDC171Q6TFL3 1326 aa24.62■■□□□ 1.53
CHMP6-204ENST00000572778 FMNL1O95466 1100 aaPredicted RBP24.62■■□□□ 1.53
CHMP6-204ENST00000572778 NEFLP07196 543 aa24.62■■□□□ 1.53
CHMP6-204ENST00000572778 PSMC4P43686 418 aa24.62■■□□□ 1.53
CHMP6-204ENST00000572778 GCLCP48506 637 aaPredicted RBP24.62■■□□□ 1.53
CHMP6-204ENST00000572778 MFAP1P55081 439 aaKnown RBP24.62■■□□□ 1.53
CHMP6-204ENST00000572778 CENPQQ7L2Z9 268 aaPredicted RBP24.62■■□□□ 1.53
CHMP6-204ENST00000572778 ANKRD13CQ8N6S4 541 aa24.62■■□□□ 1.53
CHMP6-204ENST00000572778 P2RX7Q99572 595 aaKnown RBP24.62■■□□□ 1.53
CHMP6-204ENST00000572778 PTPN22Q9Y2R2 807 aa24.62■■□□□ 1.53
CHMP6-204ENST00000572778 VCAM1P19320 739 aa24.61■■□□□ 1.53
CHMP6-204ENST00000572778 PDE4BQ07343 736 aa24.61■■□□□ 1.53
CHMP6-204ENST00000572778 SIAH1Q8IUQ4 282 aa24.61■■□□□ 1.53
CHMP6-204ENST00000572778 KANSL2Q9H9L4 492 aa24.61■■□□□ 1.53
CHMP6-204ENST00000572778 LOC285556D6RIA3 1793 aa24.61■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L15C9J2P7 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L13C9JLJ4 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L11C9JVI0 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L18D6R9N7 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L22D6RA61 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L17D6RBQ6 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L19D6RCP7 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L20D6RJB6 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 HSPD1P10809 573 aaKnown RBP24.6■■□□□ 1.53
CHMP6-204ENST00000572778 EEF2P13639 858 aaKnown RBP24.6■■□□□ 1.53
CHMP6-204ENST00000572778 CTGFP29279 349 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 USP17L24Q0WX57 530 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 ALX1Q15699 326 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 SH2D4AQ9H788 454 aa24.6■■□□□ 1.53
CHMP6-204ENST00000572778 FGAP02671 866 aa24.59■■□□□ 1.53
CHMP6-204ENST00000572778 FCGRTP55899 365 aa24.59■■□□□ 1.53
CHMP6-204ENST00000572778 HERVK_113P62684 666 aa24.59■■□□□ 1.53
CHMP6-204ENST00000572778 CTDSPL2Q05D32 466 aa24.59■■□□□ 1.53
CHMP6-204ENST00000572778 TRIM47Q96LD4 638 aa24.59■■□□□ 1.53
CHMP6-204ENST00000572778 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.59■■□□□ 1.53
CHMP6-204ENST00000572778 RPAP3Q9H6T3 665 aaPredicted RBP24.59■■□□□ 1.53
CHMP6-204ENST00000572778 TMX2Q9Y320 296 aa24.59■■□□□ 1.53
CHMP6-204ENST00000572778 GNRH1P01148 92 aa24.58■■□□□ 1.53
CHMP6-204ENST00000572778 FAM110CQ1W6H9 321 aa24.58■■□□□ 1.53
CHMP6-204ENST00000572778 CATSPERGQ6ZRH7 1159 aa24.58■■□□□ 1.53
CHMP6-204ENST00000572778 CENPBP07199 599 aaPredicted RBP24.57■■□□□ 1.52
CHMP6-204ENST00000572778 HOXD10P28358 340 aa24.57■■□□□ 1.52
CHMP6-204ENST00000572778 CCDC136Q96JN2 1154 aa24.57■■□□□ 1.52
CHMP6-204ENST00000572778 VCPKMTQ9H867 229 aa24.57■■□□□ 1.52
CHMP6-204ENST00000572778 TSPY3P0CV98 308 aa24.56■■□□□ 1.52
CHMP6-204ENST00000572778 TSPY8P0CW00 308 aa24.56■■□□□ 1.52
CHMP6-204ENST00000572778 FAM47AQ5JRC9 791 aa24.56■■□□□ 1.52
CHMP6-204ENST00000572778 KIAA1755Q5JYT7 1200 aa24.56■■□□□ 1.52
CHMP6-204ENST00000572778 SPICE1Q8N0Z3 855 aa24.56■■□□□ 1.52
CHMP6-204ENST00000572778 INCENPQ9NQS7 918 aa24.56■■□□□ 1.52
CHMP6-204ENST00000572778 ANAPC4Q9UJX5 808 aa24.56■■□□□ 1.52
CHMP6-204ENST00000572778 PTCH2Q9Y6C5 1203 aa24.56■■□□□ 1.52
CHMP6-204ENST00000572778 RAD21O60216 631 aa24.55■■□□□ 1.52
CHMP6-204ENST00000572778 PEX10O60683 326 aa24.55■■□□□ 1.52
CHMP6-204ENST00000572778 TFAP4Q01664 338 aa24.55■■□□□ 1.52
CHMP6-204ENST00000572778 LPAR1Q92633 364 aa24.55■■□□□ 1.52
CHMP6-204ENST00000572778 PAGR1Q9BTK6 254 aa24.55■■□□□ 1.52
CHMP6-204ENST00000572778 SRRDQ9UH36 339 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms