RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 AKR1B1P15121 316 aa21.34■■□□□ 1.01
CTDNEP1-207ENST00000572043 GCLCP48506 637 aaPredicted RBP21.34■■□□□ 1.01
CTDNEP1-207ENST00000572043 IRX6P78412 446 aaPredicted RBP21.34■■□□□ 1.01
CTDNEP1-207ENST00000572043 AAMPQ13685 434 aa21.34■■□□□ 1.01
CTDNEP1-207ENST00000572043 FAM110CQ1W6H9 321 aa21.34■■□□□ 1.01
CTDNEP1-207ENST00000572043 ZNF333Q96JL9 665 aa21.34■■□□□ 1.01
CTDNEP1-207ENST00000572043 SEC62Q99442 399 aaKnown RBP21.34■■□□□ 1.01
CTDNEP1-207ENST00000572043 TAOK2Q9UL54 1235 aa21.34■■□□□ 1.01
CTDNEP1-207ENST00000572043 GSG1L2A8MUP6 293 aa21.33■■□□□ 1.01
CTDNEP1-207ENST00000572043 APPP05067 770 aa21.33■■□□□ 1.01
CTDNEP1-207ENST00000572043 HOXA7P31268 230 aaPredicted RBP21.33■■□□□ 1.01
CTDNEP1-207ENST00000572043 CDK8P49336 464 aa21.33■■□□□ 1.01
CTDNEP1-207ENST00000572043 LRRFIP1Q32MZ4 808 aaKnown RBP21.33■■□□□ 1.01
CTDNEP1-207ENST00000572043 CLEC10AQ8IUN9 316 aa21.33■■□□□ 1.01
CTDNEP1-207ENST00000572043 PTPRFP10586 1907 aa21.33■■□□□ 1
CTDNEP1-207ENST00000572043 LOC285556D6RIA3 1793 aa21.33■■□□□ 1
CTDNEP1-207ENST00000572043 MINDY4BA8MYZ0 360 aa21.32■■□□□ 1
CTDNEP1-207ENST00000572043 PDE1AP54750 535 aa21.32■■□□□ 1
CTDNEP1-207ENST00000572043 HERVK_113P62684 666 aa21.32■■□□□ 1
CTDNEP1-207ENST00000572043 TMEM179Q6ZVK1 233 aa21.32■■□□□ 1
CTDNEP1-207ENST00000572043 KIAA1683Q9H0B3 1180 aa21.32■■□□□ 1
CTDNEP1-207ENST00000572043 ARPP21Q9UBL0 812 aaPredicted RBP21.32■■□□□ 1
CTDNEP1-207ENST00000572043 A0A1W2PRG0 241 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 VCAM1P19320 739 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 TDO2P48775 406 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 FLT3LGP49771 235 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 USP14P54578 494 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 C16orf86Q6ZW13 317 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 C12orf42Q96LP6 360 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 PAGR1Q9BTK6 254 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 TMEM106CQ9BVX2 250 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 EPB41L4AQ9HCS5 686 aaPredicted RBP21.31■■□□□ 1
CTDNEP1-207ENST00000572043 TXNRD2Q9NNW7 524 aa21.31■■□□□ 1
CTDNEP1-207ENST00000572043 BIN2Q9UBW5 565 aaPredicted RBP21.31■■□□□ 1
CTDNEP1-207ENST00000572043 EN2P19622 333 aaPredicted RBP21.3■■□□□ 1
CTDNEP1-207ENST00000572043 GRK4P32298 578 aa21.3■■□□□ 1
CTDNEP1-207ENST00000572043 SMC5Q8IY18 1101 aa21.3■■□□□ 1
CTDNEP1-207ENST00000572043 COA7Q96BR5 231 aa21.3■■□□□ 1
CTDNEP1-207ENST00000572043 STAP2Q9UGK3 403 aa21.3■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L15C9J2P7 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L13C9JLJ4 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L11C9JVI0 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L18D6R9N7 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L22D6RA61 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L17D6RBQ6 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L19D6RCP7 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L20D6RJB6 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 GNAT2P19087 354 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 ATP2B2Q01814 1243 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 ICA1Q05084 483 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 USP17L24Q0WX57 530 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 MTFR1Q15390 333 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 CCDC129Q6ZRS4 1044 aa21.29■■□□□ 1
CTDNEP1-207ENST00000572043 RPAP3Q9H6T3 665 aaPredicted RBP21.29■■□□□ 1
CTDNEP1-207ENST00000572043 ELNP15502 786 aa21.28■■□□□ 1
CTDNEP1-207ENST00000572043 ZMYM1Q5SVZ6 1142 aa21.28■■□□□ 1
CTDNEP1-207ENST00000572043 GPRC5AQ8NFJ5 357 aa21.28■■□□□ 1
CTDNEP1-207ENST00000572043 EVI5LQ96CN4 794 aa21.28■■□□□ 1
CTDNEP1-207ENST00000572043 CCDC17Q96LX7 622 aa21.28■■□□□ 1
CTDNEP1-207ENST00000572043 RBPJLQ9UBG7 517 aa21.28■■□□□ 1
CTDNEP1-207ENST00000572043 MORF4L1Q9UBU8 362 aa21.28■■□□□ 1
CTDNEP1-207ENST00000572043 PATL2C9JE40 543 aaKnown RBP21.27■■□□□ 1
CTDNEP1-207ENST00000572043 ADCY3O60266 1144 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 Q3C1V9 767 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 SBK1Q52WX2 424 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 GIMAP6Q6P9H5 292 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 POTEEQ6S8J3 1075 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 CATSPERGQ6ZRH7 1159 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 CHD1LQ86WJ1 897 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 IFNL3Q8IZI9 196 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 MKNK2Q9HBH9 465 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 ARHGEF10LQ9HCE6 1279 aa21.27■■□□□ 1
CTDNEP1-207ENST00000572043 TRIM6-TRIM34B2RNG4 842 aa21.26■□□□□ 0.99
CTDNEP1-207ENST00000572043 KIAA1755Q5JYT7 1200 aa21.26■□□□□ 0.99
CTDNEP1-207ENST00000572043 SIAH1Q8IUQ4 282 aa21.26■□□□□ 0.99
CTDNEP1-207ENST00000572043 SPICE1Q8N0Z3 855 aa21.26■□□□□ 0.99
CTDNEP1-207ENST00000572043 SLAIN1Q8ND83 568 aa21.26■□□□□ 0.99
CTDNEP1-207ENST00000572043 PRDM1O75626 825 aa21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 EEF2P13639 858 aaKnown RBP21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 ERVK-9P63128 1117 aa21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 ERVK-24P63145 666 aa21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 NUCB1Q02818 461 aa21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 SAMD1Q6SPF0 538 aaPredicted RBP21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 CCAR1Q8IX12 1150 aaKnown RBP21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 NACAP1Q9BZK3 213 aa21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 TANGO6Q9C0B7 1094 aa21.25■□□□□ 0.99
CTDNEP1-207ENST00000572043 MYH7P12883 1935 aa21.24■□□□□ 0.99
CTDNEP1-207ENST00000572043 RAD21O60216 631 aa21.24■□□□□ 0.99
CTDNEP1-207ENST00000572043 UBXN2AP68543 259 aa21.24■□□□□ 0.99
CTDNEP1-207ENST00000572043 GTF3C2Q8WUA4 911 aaPredicted RBP21.24■□□□□ 0.99
CTDNEP1-207ENST00000572043 NAPBQ9H115 298 aa21.24■□□□□ 0.99
CTDNEP1-207ENST00000572043 PORCNQ9H237 461 aa21.24■□□□□ 0.99
CTDNEP1-207ENST00000572043 CNMDO75829 334 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 INHAP05111 366 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 CCL5P13501 91 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 RASA1P20936 1047 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 IRF5Q13568 498 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 FAM227BQ96M60 508 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms