RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 PTH1RQ03431 593 aa10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 TAF1CQ15572 869 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 NOM1Q5C9Z4 860 aaKnown RBP10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 BMP2KLQ5H9B9 411 aa10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 KIAA1755Q5JYT7 1200 aa10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 TMEM179Q6ZVK1 233 aa10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 CLEC10AQ8IUN9 316 aa10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 ZNF296Q8WUU4 475 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 MKNK2Q9HBH9 465 aa10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 ZCCHC17Q9NP64 241 aaKnown RBP10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 ROBO3Q96MS0 1386 aa10.36□□□□□ -0.75
TRAPPC1-203ENST00000571739 CASP8AP2Q9UKL3 1982 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 IGKV6D-41A0A0C4DH26 115 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 SGSM2O43147 1006 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 TLR2O60603 784 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 CYP2C8P10632 490 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 MFAP1P55081 439 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 HAND2P61296 217 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 C17orf99Q6UX52 265 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 PROCA1Q8NCQ7 364 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 DSCC1Q9BVC3 393 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 KIAA1683Q9H0B3 1180 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 ZFYVE28Q9HCC9 887 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 AGTPBP1Q9UPW5 1226 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 SLC45A1Q9Y2W3 748 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 PTPRFP10586 1907 aa10.35□□□□□ -0.75
TRAPPC1-203ENST00000571739 EEF2P13639 858 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 HOXA7P31268 230 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 TFAP4Q01664 338 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 ZYXQ15942 572 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 USP17L2Q6R6M4 530 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 POTEEQ6S8J3 1075 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 NEDD1Q8NHV4 660 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 RUFY2Q8WXA3 655 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 C12orf42Q96LP6 360 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 KANSL2Q9H9L4 492 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 IL17RBQ9NRM6 502 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 TMX2Q9Y320 296 aa10.34□□□□□ -0.75
TRAPPC1-203ENST00000571739 ZMYM6O95789 1325 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 ADGRA2Q96PE1 1338 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 ZNF213O14771 459 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 FKTNO75072 461 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 SLC3A2P08195 630 aaKnown RBP10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 PDE4BQ07343 736 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 MAP4K1Q92918 833 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 MKL1Q969V6 931 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 P2RX7Q99572 595 aaKnown RBP10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 ASCC2Q9H1I8 757 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 TMOD4Q9NZQ9 345 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 CPA4Q9UI42 421 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 RAD50Q92878 1312 aa10.33□□□□□ -0.76
TRAPPC1-203ENST00000571739 ORC4O43929 436 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 NMT2O60551 498 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 PEX10O60683 326 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 BCRP11274 1271 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 CTGFP29279 349 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP14P54578 494 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 SP3Q02447 781 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 ICA1Q05084 483 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 AKNAD1Q5T1N1 836 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 CATSPERGQ6ZRH7 1159 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 TBC1D10CQ8IV04 446 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 STAG1Q8WVM7 1258 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 CEP95Q96GE4 821 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 ZNF287Q9HBT7 754 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 NYAP2Q9P242 653 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 CLIP2Q9UDT6 1046 aa10.32□□□□□ -0.76
TRAPPC1-203ENST00000571739 TSPY3P0CV98 308 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 TSPY8P0CW00 308 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 VCAM1P19320 739 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 NOVP48745 357 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 ATP2B2Q01814 1243 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 Q3C1V9 767 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 MFSD6Q6ZSS7 791 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 CD99L2Q8TCZ2 262 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 PARK7Q99497 189 aaKnown RBP10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 FEZ1Q99689 392 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 LSG1Q9H089 658 aaKnown RBP10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 VCPKMTQ9H867 229 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 ARHGEF10LQ9HCE6 1279 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 RBPJLQ9UBG7 517 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 CTNNA3Q9UI47 895 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 GREB1LQ9C091 1923 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC1-203ENST00000571739 TSPY2A6NKD2 308 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L15C9J2P7 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L13C9JLJ4 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L11C9JVI0 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L18D6R9N7 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L22D6RA61 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L17D6RBQ6 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L19D6RCP7 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L20D6RJB6 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 F5H6K3 240 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms