RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ZDHHC15Q96MV8 337 aa8.88□□□□□ -0.99
CHD3-213ENST00000571249 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
CHD3-213ENST00000571249 RBPJLQ9UBG7 517 aa8.88□□□□□ -0.99
CHD3-213ENST00000571249 PRR23AA6NEV1 266 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 ARHGEF15O94989 841 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 CYBAP13498 195 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 SLC5A1P13866 664 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 GYG1P46976 350 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 HMGCS2P54868 508 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 SPP2Q13103 211 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 MAP2K5Q13163 448 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 PPIGQ13427 754 aaKnown RBP eCLIP8.87□□□□□ -0.99
CHD3-213ENST00000571249 OTOP2Q7RTS6 562 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 SPRED2Q7Z698 418 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 NPLOC4Q8TAT6 608 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 ARNTL2Q8WYA1 636 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 PLEKHF1Q96S99 279 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 PHAXQ9H814 394 aaKnown RBP8.87□□□□□ -0.99
CHD3-213ENST00000571249 IQSEC3Q9UPP2 1182 aaPredicted RBP8.87□□□□□ -0.99
CHD3-213ENST00000571249 PLXNA3P51805 1871 aa8.87□□□□□ -0.99
CHD3-213ENST00000571249 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.86□□□□□ -0.99
CHD3-213ENST00000571249 H0Y858 1186 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 PLIN1O60240 522 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 LPXNO60711 386 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 KCNA5P22460 613 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 MAPK4P31152 587 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 ATP2B2Q01814 1243 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 GRB10Q13322 594 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 ACAP1Q15027 740 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 LEXMQ3ZCV2 418 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 PRAMEF19Q5SWL8 479 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 SMYD5Q6GMV2 418 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 PTCRAQ6ISU1 281 aaPredicted RBP8.86□□□□□ -0.99
CHD3-213ENST00000571249 DGLUCYQ7Z3D6 616 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
CHD3-213ENST00000571249 RMDN1Q96DB5 314 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 RNF39Q9H2S5 420 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 UBE2ZQ9H832 354 aaPredicted RBP8.86□□□□□ -0.99
CHD3-213ENST00000571249 TLR9Q9NR96 1032 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 FAM198AQ9UFP1 575 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 MUTYHQ9UIF7 546 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 TBX21Q9UL17 535 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
CHD3-213ENST00000571249 ZNF521Q96K83 1311 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 PHIPQ8WWQ0 1821 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 PROB1E7EW31 1015 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 ZMYND10O75800 440 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 IGHA2P01877 340 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 CA3P07451 260 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 HDLBPQ00341 1268 aaKnown RBP8.85□□□□□ -0.99
CHD3-213ENST00000571249 C1QBPQ07021 282 aaKnown RBP8.85□□□□□ -0.99
CHD3-213ENST00000571249 CHAF1AQ13111 956 aaPredicted RBP8.85□□□□□ -0.99
CHD3-213ENST00000571249 FAM47AQ5JRC9 791 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 PSRC1Q6PGN9 363 aaPredicted RBP8.85□□□□□ -0.99
CHD3-213ENST00000571249 CCAR1Q8IX12 1150 aaKnown RBP8.85□□□□□ -0.99
CHD3-213ENST00000571249 PBXIP1Q96AQ6 731 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 FAM84BQ96KN1 310 aaPredicted RBP8.85□□□□□ -0.99
CHD3-213ENST00000571249 METTL22Q9BUU2 404 aaPredicted RBP8.85□□□□□ -0.99
CHD3-213ENST00000571249 PPP1R12CQ9BZL4 782 aa8.85□□□□□ -0.99
CHD3-213ENST00000571249 ASPMQ8IZT6 3477 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 DLG5Q8TDM6 1919 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 DCDC2CA8MYV0 355 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 APBB1O00213 710 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 CTNND1O60716 968 aaKnown RBP8.84□□□□□ -0.99
CHD3-213ENST00000571249 FGBP02675 491 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 IRS1P35568 1242 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 VCPP55072 806 aaKnown RBP8.84□□□□□ -0.99
CHD3-213ENST00000571249 ERVK-9P63128 1117 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 ERVK-24P63145 666 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 ST3GAL2Q16842 350 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 EPHA10Q5JZY3 1008 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 CDC42EP5Q6NZY7 148 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 CCDC174Q6PII3 467 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 SH3BP5LQ7L8J4 393 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 ANKRD33Q7Z3H0 272 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 PAGR1Q9BTK6 254 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 PCDHA11Q9Y5I1 949 aa8.84□□□□□ -0.99
CHD3-213ENST00000571249 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
CHD3-213ENST00000571249 A0A1W2PQ45 241 aaPredicted RBP8.83□□□□□ -1
CHD3-213ENST00000571249 A0A1W2PQY0 241 aa8.83□□□□□ -1
CHD3-213ENST00000571249 PGK1P00558 417 aa8.83□□□□□ -1
CHD3-213ENST00000571249 PPP2R1AP30153 589 aa8.83□□□□□ -1
CHD3-213ENST00000571249 HIBADHP31937 336 aaKnown RBP8.83□□□□□ -1
CHD3-213ENST00000571249 CYP2C18P33260 490 aa8.83□□□□□ -1
CHD3-213ENST00000571249 RIPK4P57078 832 aa8.83□□□□□ -1
CHD3-213ENST00000571249 HERVK_113P62684 666 aa8.83□□□□□ -1
CHD3-213ENST00000571249 IRX3P78415 501 aaPredicted RBP8.83□□□□□ -1
CHD3-213ENST00000571249 ZP2Q05996 745 aa8.83□□□□□ -1
CHD3-213ENST00000571249 ADSSL1Q8N142 457 aa8.83□□□□□ -1
CHD3-213ENST00000571249 TMEM199Q8N511 208 aa8.83□□□□□ -1
CHD3-213ENST00000571249 TOX2Q96NM4 488 aa8.83□□□□□ -1
CHD3-213ENST00000571249 PRRX2Q99811 253 aa8.83□□□□□ -1
CHD3-213ENST00000571249 FSD1Q9BTV5 496 aa8.83□□□□□ -1
CHD3-213ENST00000571249 IL23AQ9NPF7 189 aa8.83□□□□□ -1
CHD3-213ENST00000571249 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
CHD3-213ENST00000571249 NAV2Q8IVL1 2488 aa8.82□□□□□ -1
CHD3-213ENST00000571249 MAPK8IP3Q9UPT6 1336 aa8.82□□□□□ -1
CHD3-213ENST00000571249 C19orf67A6NJJ6 358 aa8.82□□□□□ -1
CHD3-213ENST00000571249 H3BQ06 376 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms