RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 ACER1Q8TDN7 264 aa13.33□□□□□ -0.28
SMG6-206ENST00000570668 C12orf42Q96LP6 360 aa13.33□□□□□ -0.28
SMG6-206ENST00000570668 NACAP1Q9BZK3 213 aa13.33□□□□□ -0.28
SMG6-206ENST00000570668 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
SMG6-206ENST00000570668 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
SMG6-206ENST00000570668 HPS5Q9UPZ3 1129 aa13.33□□□□□ -0.28
SMG6-206ENST00000570668 PTPN22Q9Y2R2 807 aa13.33□□□□□ -0.28
SMG6-206ENST00000570668 MYH8P13535 1937 aa13.33□□□□□ -0.28
SMG6-206ENST00000570668 ROBO3Q96MS0 1386 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 CCDC85CA6NKD9 419 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 MINDY4BA8MYZ0 360 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 MPHOSPH10O00566 681 aaKnown RBP13.32□□□□□ -0.28
SMG6-206ENST00000570668 GNRH1P01148 92 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 AKR1B1P15121 316 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 OSBPP22059 807 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
SMG6-206ENST00000570668 TDO2P48775 406 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 USP14P54578 494 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 FEZ1Q99689 392 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 ARHGAP39Q9C0H5 1083 aa13.32□□□□□ -0.28
SMG6-206ENST00000570668 FOXP2O15409 715 aa13.31□□□□□ -0.28
SMG6-206ENST00000570668 PDE4AP27815 886 aa13.31□□□□□ -0.28
SMG6-206ENST00000570668 CTGFP29279 349 aa13.31□□□□□ -0.28
SMG6-206ENST00000570668 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
SMG6-206ENST00000570668 RILPL2Q969X0 211 aa13.31□□□□□ -0.28
SMG6-206ENST00000570668 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
SMG6-206ENST00000570668 NAPBQ9H115 298 aa13.31□□□□□ -0.28
SMG6-206ENST00000570668 A0A0D9SFI3 127 aa13.3□□□□□ -0.28
SMG6-206ENST00000570668 A0A1W2PRG0 241 aa13.3□□□□□ -0.28
SMG6-206ENST00000570668 PSMC4P43686 418 aa13.3□□□□□ -0.28
SMG6-206ENST00000570668 PRMT2P55345 433 aa13.3□□□□□ -0.28
SMG6-206ENST00000570668 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
SMG6-206ENST00000570668 ZYXQ15942 572 aaKnown RBP13.3□□□□□ -0.28
SMG6-206ENST00000570668 FAM110CQ1W6H9 321 aa13.3□□□□□ -0.28
SMG6-206ENST00000570668 MCMDC2Q4G0Z9 681 aa13.3□□□□□ -0.28
SMG6-206ENST00000570668 SIAH1Q8IUQ4 282 aa13.3□□□□□ -0.28
SMG6-206ENST00000570668 TRIM47Q96LD4 638 aa13.3□□□□□ -0.28
SMG6-206ENST00000570668 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 VCAM1P19320 739 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 SDSP20132 328 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 RASA1P20936 1047 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 HOXD10P28358 340 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 HERVK_113P62684 666 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 ICA1Q05084 483 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
SMG6-206ENST00000570668 ALX1Q15699 326 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 ANKRD13CQ8N6S4 541 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 P2RX7Q99572 595 aaKnown RBP13.29□□□□□ -0.28
SMG6-206ENST00000570668 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMG6-206ENST00000570668 KANSL2Q9H9L4 492 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 ZNF287Q9HBT7 754 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 MORF4L1Q9UBU8 362 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 SRRDQ9UH36 339 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
SMG6-206ENST00000570668 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 FMNL1O95466 1100 aaPredicted RBP13.28□□□□□ -0.28
SMG6-206ENST00000570668 FCGRTP55899 365 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 PPARAQ07869 468 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 CATSPERGQ6ZRH7 1159 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
SMG6-206ENST00000570668 CLEC10AQ8IUN9 316 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 GTF3C2Q8WUA4 911 aaPredicted RBP13.28□□□□□ -0.28
SMG6-206ENST00000570668 SH2D4AQ9H788 454 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 ARHGEF10LQ9HCE6 1279 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 PTCH2Q9Y6C5 1203 aa13.28□□□□□ -0.28
SMG6-206ENST00000570668 MGAMO43451 1857 aa13.27□□□□□ -0.28
SMG6-206ENST00000570668 GREB1LQ9C091 1923 aaPredicted RBP13.27□□□□□ -0.28
SMG6-206ENST00000570668 HIP1O00291 1037 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.29
SMG6-206ENST00000570668 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.29
SMG6-206ENST00000570668 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
SMG6-206ENST00000570668 PDE4BQ07343 736 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 TTC22Q5TAA0 569 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 ZNF444Q8N0Y2 327 aaPredicted RBP13.27□□□□□ -0.29
SMG6-206ENST00000570668 STK11IPQ8N1F8 1099 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 LPAR1Q92633 364 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 ARMC5Q96C12 935 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 VCPKMTQ9H867 229 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 ANAPC4Q9UJX5 808 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.29
SMG6-206ENST00000570668 BRCA2P51587 3418 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 PRDM1O75626 825 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 FGAP02671 866 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
SMG6-206ENST00000570668 GSPT1P15170 499 aaKnown RBP13.26□□□□□ -0.29
SMG6-206ENST00000570668 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
SMG6-206ENST00000570668 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
SMG6-206ENST00000570668 KIAA1755Q5JYT7 1200 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms