RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	SULF2	Q8IWU5	870 aa		6.66	□□□□□ -1.34
UBR1-209	ENST00000569243	ZNF552	Q9H707	407 aa	Predicted RBP	6.66	□□□□□ -1.34
UBR1-209	ENST00000569243	SP110	Q9HB58	689 aa		6.66	□□□□□ -1.34
UBR1-209	ENST00000569243	BIN2	Q9UBW5	565 aa	Predicted RBP	6.66	□□□□□ -1.34
UBR1-209	ENST00000569243	MYRF	Q9Y2G1	1151 aa		6.66	□□□□□ -1.34
UBR1-209	ENST00000569243	GSTT1	P30711	240 aa		6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	AFF3	P51826	1226 aa	Known RBP	6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	ZNF252P-AS1	Q0IIN9	211 aa		6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	VMAC	Q2NL98	169 aa		6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	SYT8	Q8NBV8	401 aa		6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	C3orf58	Q8NDZ4	430 aa		6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	GPR20	Q99678	358 aa		6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	CEP44	Q9C0F1	390 aa		6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	SAMM50	Q9Y512	469 aa		6.65	□□□□□ -1.34
UBR1-209	ENST00000569243	PNMA6F	A0A0J9YX94	578 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	LRIG2	O94898	1065 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	MAPK1	P28482	360 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	PDE6B	P35913	854 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	ALG1L	Q6GMV1	187 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	NXPE4	Q6UWF7	544 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	MPRIP	Q6WCQ1	1025 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	INTS4	Q96HW7	963 aa	Known RBP	6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	TEPSIN	Q96N21	525 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	MIPEP	Q99797	713 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	BDH2	Q9BUT1	245 aa		6.64	□□□□□ -1.35
UBR1-209	ENST00000569243	SLC22A31	A6NKX4	558 aa		6.63	□□□□□ -1.35
UBR1-209	ENST00000569243	TIGD5	Q53EQ6	642 aa		6.63	□□□□□ -1.35
UBR1-209	ENST00000569243	ZBTB37	Q5TC79	503 aa		6.63	□□□□□ -1.35
UBR1-209	ENST00000569243	PI16	Q6UXB8	463 aa		6.63	□□□□□ -1.35
UBR1-209	ENST00000569243	DACT3	Q96B18	629 aa	Predicted RBP	6.63	□□□□□ -1.35
UBR1-209	ENST00000569243	NECAB3	Q96P71	396 aa	Predicted RBP	6.63	□□□□□ -1.35
UBR1-209	ENST00000569243	AKAP2	Q9Y2D5	859 aa		6.63	□□□□□ -1.35
UBR1-209	ENST00000569243	IRAK3	Q9Y616	596 aa		6.63	□□□□□ -1.35
UBR1-209	ENST00000569243	FANCG	O15287	622 aa		6.62	□□□□□ -1.35
UBR1-209	ENST00000569243	FMR1	Q06787	632 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
UBR1-209	ENST00000569243	TMPRSS7	Q7RTY8	843 aa		6.62	□□□□□ -1.35
UBR1-209	ENST00000569243	CREG2	Q8IUH2	290 aa		6.62	□□□□□ -1.35
UBR1-209	ENST00000569243	SIGLEC10	Q96LC7	697 aa		6.62	□□□□□ -1.35
UBR1-209	ENST00000569243	ASB16	Q96NS5	453 aa		6.62	□□□□□ -1.35
UBR1-209	ENST00000569243	WASH4P	A8MWX3	477 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	TRIM37	O94972	964 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	RING1	Q06587	406 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	KCNA1	Q09470	495 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	LRRC14	Q15048	493 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	LILRA2	Q8N149	483 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	KCT2	Q8NC54	265 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	PDZD8	Q8NEN9	1154 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	RIN3	Q8TB24	985 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	FRMD6	Q96NE9	622 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	CBX8	Q9HC52	389 aa		6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	CWC22	Q9HCG8	908 aa	Known RBP	6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	YBX2	Q9Y2T7	364 aa	Known RBP	6.61	□□□□□ -1.35
UBR1-209	ENST00000569243	BMP6	P22004	513 aa		6.6	□□□□□ -1.35
UBR1-209	ENST00000569243	ZXDA	P98168	799 aa		6.6	□□□□□ -1.35
UBR1-209	ENST00000569243	TNK2	Q07912	1038 aa		6.6	□□□□□ -1.35
UBR1-209	ENST00000569243	HHIPL2	Q6UWX4	724 aa		6.6	□□□□□ -1.35
UBR1-209	ENST00000569243	SP8	Q8IXZ3	490 aa		6.6	□□□□□ -1.35
UBR1-209	ENST00000569243	CYP8B1	Q9UNU6	501 aa		6.6	□□□□□ -1.35
UBR1-209	ENST00000569243	ZC3H12D	A2A288	527 aa	Known RBP	6.59	□□□□□ -1.35
UBR1-209	ENST00000569243	PATL2	C9JE40	543 aa	Known RBP	6.59	□□□□□ -1.35
UBR1-209	ENST00000569243	ENC1	O14682	589 aa		6.59	□□□□□ -1.35
UBR1-209	ENST00000569243	OXR1	Q8N573	874 aa		6.59	□□□□□ -1.35
UBR1-209	ENST00000569243	SPG7	Q9UQ90	795 aa		6.59	□□□□□ -1.35
UBR1-209	ENST00000569243	ATP2B2	Q01814	1243 aa		6.58	□□□□□ -1.36
UBR1-209	ENST00000569243	ZNF507	Q8TCN5	953 aa		6.58	□□□□□ -1.36
UBR1-209	ENST00000569243	OSBPL7	Q9BZF2	842 aa		6.58	□□□□□ -1.36
UBR1-209	ENST00000569243	ZGLP1	P0C6A0	271 aa		6.57	□□□□□ -1.36
UBR1-209	ENST00000569243	GALK1	P51570	392 aa		6.57	□□□□□ -1.36
UBR1-209	ENST00000569243	FBRS	Q9HAH7	460 aa		6.57	□□□□□ -1.36
UBR1-209	ENST00000569243	FAM8A1	Q9UBU6	413 aa		6.57	□□□□□ -1.36
UBR1-209	ENST00000569243	MBD1	Q9UIS9	605 aa	Predicted RBP	6.57	□□□□□ -1.36
UBR1-209	ENST00000569243	FITM1	A5D6W6	292 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	MAPK8	P45983	427 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	EPHB3	P54753	998 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	LLGL2	Q6P1M3	1020 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	LETMD1	Q6P1Q0	360 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	FRMD5	Q7Z6J6	570 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	SLC16A11	Q8NCK7	471 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	GRIN3A	Q8TCU5	1115 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	SRRD	Q9UH36	339 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	GPR160	Q9UJ42	338 aa		6.56	□□□□□ -1.36
UBR1-209	ENST00000569243	TNFRSF1A	P19438	455 aa		6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	SRSF3	P84103	164 aa	Known RBP	6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	SLBP	Q14493	270 aa	Known RBP eCLIP	6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	RTP5	Q14D33	572 aa		6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	TPTE2	Q6XPS3	522 aa		6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	SV2B	Q7L1I2	683 aa		6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	C12orf49	Q9H741	205 aa		6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	LUC7L	Q9NQ29	371 aa	Known RBP	6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	PALD1	Q9ULE6	856 aa		6.55	□□□□□ -1.36
UBR1-209	ENST00000569243	PRICKLE3	O43900	615 aa	Predicted RBP	6.54	□□□□□ -1.36
UBR1-209	ENST00000569243	GRIN3B	O60391	1043 aa		6.54	□□□□□ -1.36
UBR1-209	ENST00000569243	FSHB	P01225	129 aa		6.54	□□□□□ -1.36
UBR1-209	ENST00000569243	TPP2	P29144	1249 aa	Predicted RBP	6.54	□□□□□ -1.36
UBR1-209	ENST00000569243	CAP2	P40123	477 aa		6.54	□□□□□ -1.36
UBR1-209	ENST00000569243	KIR3DL1	P43629	444 aa		6.54	□□□□□ -1.36

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