RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 TCP10L2B9ZVM9 353 aa11.2□□□□□ -0.62
CAPN3-219ENST00000569136 IREB2P48200 963 aaKnown RBP11.2□□□□□ -0.62
CAPN3-219ENST00000569136 SH3BP2P78314 561 aa11.2□□□□□ -0.62
CAPN3-219ENST00000569136 MAP3K11Q16584 847 aa11.2□□□□□ -0.62
CAPN3-219ENST00000569136 LDLRAD1Q5T700 205 aa11.2□□□□□ -0.62
CAPN3-219ENST00000569136 CYP4F22Q6NT55 531 aa11.2□□□□□ -0.62
CAPN3-219ENST00000569136 AIDAQ96BJ3 306 aa11.2□□□□□ -0.62
CAPN3-219ENST00000569136 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
CAPN3-219ENST00000569136 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
CAPN3-219ENST00000569136 DBNLQ9UJU6 430 aaKnown RBP11.2□□□□□ -0.62
CAPN3-219ENST00000569136 ADAMTSL1Q8N6G6 1762 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 GPR75-ASB3A0A0A6YYF3 556 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 UBE2Q2LH0YL09 131 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 CA12O43570 354 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 MCAMP43121 646 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 CDC42EP5Q6NZY7 148 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 ZNF598Q86UK7 904 aaKnown RBP11.19□□□□□ -0.62
CAPN3-219ENST00000569136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.19□□□□□ -0.62
CAPN3-219ENST00000569136 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 SLC10A4Q96EP9 437 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 LRRCC1Q9C099 1032 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 RAI14Q9P0K7 980 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 SCAF8Q9UPN6 1271 aaKnown RBP11.19□□□□□ -0.62
CAPN3-219ENST00000569136 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
CAPN3-219ENST00000569136 GAKO14976 1311 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 BAG3O95817 575 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 WNT7BP56706 349 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 SKOR1P84550 965 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 MECOMQ03112 1051 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 PTK2Q05397 1052 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 TTF1Q15361 905 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-219ENST00000569136 NBPF12Q5TAG4 269 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-219ENST00000569136 TBC1D9Q6ZT07 1266 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 EHBP1Q8NDI1 1231 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.62
CAPN3-219ENST00000569136 NSUN4Q96CB9 384 aaKnown RBP11.18□□□□□ -0.62
CAPN3-219ENST00000569136 ARHGAP9Q9BRR9 750 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 NOL10Q9BSC4 688 aaKnown RBP11.18□□□□□ -0.62
CAPN3-219ENST00000569136 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 IL1RAPL2Q9NP60 686 aa11.18□□□□□ -0.62
CAPN3-219ENST00000569136 ANGEL1Q9UNK9 670 aaKnown RBP11.18□□□□□ -0.62
CAPN3-219ENST00000569136 COL1A1P02452 1464 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-219ENST00000569136 ENTPD3O75355 529 aa11.17□□□□□ -0.62
CAPN3-219ENST00000569136 USP2O75604 605 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-219ENST00000569136 RGS20O76081 388 aa11.17□□□□□ -0.62
CAPN3-219ENST00000569136 CYP2E1P05181 493 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-219ENST00000569136 INHBEP58166 350 aa11.17□□□□□ -0.62
CAPN3-219ENST00000569136 MAP3K12Q12852 859 aa11.17□□□□□ -0.62
CAPN3-219ENST00000569136 GRM1Q13255 1194 aa11.17□□□□□ -0.62
CAPN3-219ENST00000569136 DCAF15Q66K64 600 aa11.17□□□□□ -0.62
CAPN3-219ENST00000569136 BPHLQ86WA6 291 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-219ENST00000569136 TEPSINQ96N21 525 aa11.17□□□□□ -0.62
CAPN3-219ENST00000569136 AOX1Q06278 1338 aa11.16□□□□□ -0.62
CAPN3-219ENST00000569136 FAM155AB1AL88 458 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-219ENST00000569136 HSPA1AP0DMV8 641 aaKnown RBP11.16□□□□□ -0.62
CAPN3-219ENST00000569136 HSPA1BP0DMV9 641 aaKnown RBP11.16□□□□□ -0.62
CAPN3-219ENST00000569136 ZAP70P43403 619 aa11.16□□□□□ -0.62
CAPN3-219ENST00000569136 CTCFP49711 727 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-219ENST00000569136 KIF23Q02241 960 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-219ENST00000569136 NAA16Q6N069 864 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-219ENST00000569136 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
CAPN3-219ENST00000569136 PI16Q6UXB8 463 aa11.16□□□□□ -0.62
CAPN3-219ENST00000569136 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
CAPN3-219ENST00000569136 ANKRD13AQ8IZ07 590 aa11.16□□□□□ -0.62
CAPN3-219ENST00000569136 TMEM39BQ9GZU3 492 aa11.16□□□□□ -0.62
CAPN3-219ENST00000569136 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 AOC2O75106 756 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 ATP5JP18859 108 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 BTDP43251 543 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 CACNB3P54284 484 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 HDAC1Q13547 482 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-219ENST00000569136 PRKG1Q13976 671 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 MOB2Q70IA6 237 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 GPATCH3Q96I76 525 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 CRBNQ96SW2 442 aa11.15□□□□□ -0.62
CAPN3-219ENST00000569136 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-219ENST00000569136 TLR7Q9NYK1 1049 aaKnown RBP11.15□□□□□ -0.62
CAPN3-219ENST00000569136 ZBTB48P10074 688 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-219ENST00000569136 TM4SF4P48230 202 aa11.14□□□□□ -0.63
CAPN3-219ENST00000569136 TCP10Q12799 353 aa11.14□□□□□ -0.63
CAPN3-219ENST00000569136 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
CAPN3-219ENST00000569136 CSRNP1Q96S65 589 aa11.14□□□□□ -0.63
CAPN3-219ENST00000569136 PIH1D3Q9NQM4 214 aaKnown RBP11.14□□□□□ -0.63
CAPN3-219ENST00000569136 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
CAPN3-219ENST00000569136 SUPT16HQ9Y5B9 1047 aaKnown RBP11.14□□□□□ -0.63
CAPN3-219ENST00000569136 CSADQ9Y600 493 aa11.14□□□□□ -0.63
CAPN3-219ENST00000569136 PCNTO95613 3336 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-219ENST00000569136 IDH1O75874 414 aaKnown RBP11.13□□□□□ -0.63
CAPN3-219ENST00000569136 CYP7A1P22680 504 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 RGS3P49796 1198 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 RHBDL3P58872 404 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 SREBF2Q12772 1141 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 NFIAQ12857 509 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 RASAL3Q86YV0 1011 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms