RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 C16orf86Q6ZW13 317 aa27.3■■□□□ 1.96
SPG7-217ENST00000568151 ANKRD13CQ8N6S4 541 aa27.3■■□□□ 1.96
SPG7-217ENST00000568151 FEZ1Q99689 392 aa27.3■■□□□ 1.96
SPG7-217ENST00000568151 EPB41L4AQ9HCS5 686 aaPredicted RBP27.3■■□□□ 1.96
SPG7-217ENST00000568151 MPHOSPH10O00566 681 aaKnown RBP27.29■■□□□ 1.96
SPG7-217ENST00000568151 FMNL1O95466 1100 aaPredicted RBP27.29■■□□□ 1.96
SPG7-217ENST00000568151 AKR1B1P15121 316 aa27.29■■□□□ 1.96
SPG7-217ENST00000568151 GNAT2P19087 354 aa27.29■■□□□ 1.96
SPG7-217ENST00000568151 SBK1Q52WX2 424 aa27.29■■□□□ 1.96
SPG7-217ENST00000568151 C12orf42Q96LP6 360 aa27.29■■□□□ 1.96
SPG7-217ENST00000568151 KIAA1683Q9H0B3 1180 aa27.29■■□□□ 1.96
SPG7-217ENST00000568151 ZYXQ15942 572 aaKnown RBP27.28■■□□□ 1.96
SPG7-217ENST00000568151 TMEM179Q6ZVK1 233 aa27.28■■□□□ 1.96
SPG7-217ENST00000568151 ARMC5Q96C12 935 aa27.28■■□□□ 1.96
SPG7-217ENST00000568151 GCLCP48506 637 aaPredicted RBP27.27■■□□□ 1.96
SPG7-217ENST00000568151 PRMT2P55345 433 aa27.27■■□□□ 1.96
SPG7-217ENST00000568151 FCGRTP55899 365 aa27.27■■□□□ 1.96
SPG7-217ENST00000568151 IRX3P78415 501 aaPredicted RBP27.27■■□□□ 1.96
SPG7-217ENST00000568151 FAM110CQ1W6H9 321 aa27.27■■□□□ 1.96
SPG7-217ENST00000568151 PLEKHM2Q8IWE5 1019 aa27.27■■□□□ 1.96
SPG7-217ENST00000568151 P2RX7Q99572 595 aaKnown RBP27.27■■□□□ 1.96
SPG7-217ENST00000568151 SRRDQ9UH36 339 aa27.27■■□□□ 1.96
SPG7-217ENST00000568151 A0A1W2PRG0 241 aa27.26■■□□□ 1.95
SPG7-217ENST00000568151 PATL2C9JE40 543 aaKnown RBP27.26■■□□□ 1.95
SPG7-217ENST00000568151 USP14P54578 494 aa27.26■■□□□ 1.95
SPG7-217ENST00000568151 CCDC17Q96LX7 622 aa27.26■■□□□ 1.95
SPG7-217ENST00000568151 CLEC10AQ8IUN9 316 aa27.25■■□□□ 1.95
SPG7-217ENST00000568151 SIAH1Q8IUQ4 282 aa27.25■■□□□ 1.95
SPG7-217ENST00000568151 IFNL3Q8IZI9 196 aa27.25■■□□□ 1.95
SPG7-217ENST00000568151 DOCK3Q8IZD9 2030 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 ROBO3Q96MS0 1386 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 MINDY4BA8MYZ0 360 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 APPP05067 770 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 HOXD10P28358 340 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 TDO2P48775 406 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 HERVK_113P62684 666 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 CCDC129Q6ZRS4 1044 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 OSBPL3Q9H4L5 887 aa27.24■■□□□ 1.95
SPG7-217ENST00000568151 MYPNQ86TC9 1320 aa27.23■■□□□ 1.95
SPG7-217ENST00000568151 VCAM1P19320 739 aa27.23■■□□□ 1.95
SPG7-217ENST00000568151 SLC9C1Q4G0N8 1177 aa27.23■■□□□ 1.95
SPG7-217ENST00000568151 MORF4L1Q9UBU8 362 aa27.23■■□□□ 1.95
SPG7-217ENST00000568151 FOXP2O15409 715 aa27.22■■□□□ 1.95
SPG7-217ENST00000568151 PEX10O60683 326 aa27.22■■□□□ 1.95
SPG7-217ENST00000568151 PRKCZQ05513 592 aa27.22■■□□□ 1.95
SPG7-217ENST00000568151 POTEEQ6S8J3 1075 aa27.22■■□□□ 1.95
SPG7-217ENST00000568151 STK11IPQ8N1F8 1099 aa27.22■■□□□ 1.95
SPG7-217ENST00000568151 ZNF333Q96JL9 665 aa27.22■■□□□ 1.95
SPG7-217ENST00000568151 GABRQQ9UN88 632 aa27.22■■□□□ 1.95
SPG7-217ENST00000568151 GREB1LQ9C091 1923 aaPredicted RBP27.22■■□□□ 1.95
SPG7-217ENST00000568151 USP17L15C9J2P7 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 USP17L13C9JLJ4 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 USP17L11C9JVI0 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 USP17L18D6R9N7 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 USP17L22D6RA61 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 USP17L17D6RBQ6 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 USP17L19D6RCP7 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 USP17L20D6RJB6 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 USP17L24Q0WX57 530 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 TXNRD2Q9NNW7 524 aa27.21■■□□□ 1.95
SPG7-217ENST00000568151 TRIM6-TRIM34B2RNG4 842 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 TNPO2O14787 897 aaKnown RBP27.2■■□□□ 1.94
SPG7-217ENST00000568151 RASA1P20936 1047 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 ICA1Q05084 483 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 CATSPERGQ6ZRH7 1159 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 TICAM2Q86XR7 235 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 SH3TC2Q8TF17 1288 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 FAM227BQ96M60 508 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.2■■□□□ 1.94
SPG7-217ENST00000568151 NACAP1Q9BZK3 213 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 HELLSQ9NRZ9 838 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 RBPJLQ9UBG7 517 aa27.2■■□□□ 1.94
SPG7-217ENST00000568151 KIAA0100Q14667 2235 aaKnown RBP27.2■■□□□ 1.94
SPG7-217ENST00000568151 KIAA1755Q5JYT7 1200 aa27.19■■□□□ 1.94
SPG7-217ENST00000568151 NBPF11Q86T75 865 aa27.19■■□□□ 1.94
SPG7-217ENST00000568151 RAET1EQ8TD07 263 aa27.19■■□□□ 1.94
SPG7-217ENST00000568151 RPAP3Q9H6T3 665 aaPredicted RBP27.19■■□□□ 1.94
SPG7-217ENST00000568151 RBBP6Q7Z6E9 1792 aaKnown RBP27.18■■□□□ 1.94
SPG7-217ENST00000568151 A0A0D9SFI3 127 aa27.18■■□□□ 1.94
SPG7-217ENST00000568151 MLLT1Q03111 559 aaPredicted RBP27.18■■□□□ 1.94
SPG7-217ENST00000568151 VPS53Q5VIR6 699 aa27.18■■□□□ 1.94
SPG7-217ENST00000568151 RILPL2Q969X0 211 aa27.18■■□□□ 1.94
SPG7-217ENST00000568151 NAPBQ9H115 298 aa27.18■■□□□ 1.94
SPG7-217ENST00000568151 KANSL2Q9H9L4 492 aa27.18■■□□□ 1.94
SPG7-217ENST00000568151 MKNK2Q9HBH9 465 aa27.18■■□□□ 1.94
SPG7-217ENST00000568151 ARHGEF10LQ9HCE6 1279 aa27.18■■□□□ 1.94
SPG7-217ENST00000568151 TMX2Q9Y320 296 aa27.18■■□□□ 1.94
SPG7-217ENST00000568151 EEF2P13639 858 aaKnown RBP27.17■■□□□ 1.94
SPG7-217ENST00000568151 FLT3LGP49771 235 aa27.17■■□□□ 1.94
SPG7-217ENST00000568151 GPRC5AQ8NFJ5 357 aa27.17■■□□□ 1.94
SPG7-217ENST00000568151 GTF3C2Q8WUA4 911 aaPredicted RBP27.17■■□□□ 1.94
SPG7-217ENST00000568151 BRCA2P51587 3418 aa27.17■■□□□ 1.94
SPG7-217ENST00000568151 POTEFA5A3E0 1075 aa27.16■■□□□ 1.94
SPG7-217ENST00000568151 PDE4AP27815 886 aa27.16■■□□□ 1.94
SPG7-217ENST00000568151 NMIQ13287 307 aaPredicted RBP27.16■■□□□ 1.94
SPG7-217ENST00000568151 PRDM1O75626 825 aa27.15■■□□□ 1.94
SPG7-217ENST00000568151 GRK4P32298 578 aa27.15■■□□□ 1.94
SPG7-217ENST00000568151 ERVK-9P63128 1117 aa27.15■■□□□ 1.94
SPG7-217ENST00000568151 ERVK-24P63145 666 aa27.15■■□□□ 1.94
SPG7-217ENST00000568151 PPARAQ07869 468 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms