RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 EVX2Q03828 476 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 C17orf99Q6UX52 265 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 TTC6Q86TZ1 520 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 FOXP4Q8IVH2 680 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 RAET1EQ8TD07 263 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 DCTPP1Q9H773 170 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
GTF3C1-206ENST00000566779 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 TCRBV5S4A2TA0A5A2 114 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 PRKAB2O43741 272 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 IGSF3O75054 1194 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 CTGFP29279 349 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 PLCD1P51178 756 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 FCGRTP55899 365 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 TMEM132AQ24JP5 1023 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 STK11IPQ8N1F8 1099 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 DDRGK1Q96HY6 314 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 TRIM47Q96LD4 638 aa12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 BIN2Q9UBW5 565 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-206ENST00000566779 TNPO2O14787 897 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 OSBPP22059 807 aa12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 TIE1P35590 1138 aa12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 ABCB5Q2M3G0 1257 aa12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 ZSCAN25Q6NSZ9 544 aa12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 SLC44A5Q8NCS7 719 aa12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 SLC4A4Q9Y6R1 1079 aa12.18□□□□□ -0.46
GTF3C1-206ENST00000566779 PLXNB2O15031 1838 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 CYP2D7A0A087X1C5 515 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 USP17L10C9JJH3 530 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 PEX10O60683 326 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 BCRP11274 1271 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 HOXD10P28358 340 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 PRKCZQ05513 592 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 DYNLL2Q96FJ2 89 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 PAGR1Q9BTK6 254 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 FSD1Q9BTV5 496 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 TBC1D2Q9BYX2 928 aa12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 ASCC2Q9H1I8 757 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 DCP1AQ9NPI6 582 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-206ENST00000566779 COL11A1P12107 1806 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 TTLL13PA6NNM8 815 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 SHMT1P34896 483 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 BACE1P56817 501 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 ANKRD45Q5TZF3 282 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 NBPF11Q86T75 865 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 CLEC10AQ8IUN9 316 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 WDR18Q9BV38 432 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 EHD4Q9H223 541 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 CWC22Q9HCG8 908 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 SRRDQ9UH36 339 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 GABRQQ9UN88 632 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 PARP14Q460N5 1801 aa12.16□□□□□ -0.46
GTF3C1-206ENST00000566779 ERC2O15083 957 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 RAD21O60216 631 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 MX1P20591 662 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 RGS19P49795 217 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 SEPT2Q15019 361 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 CCAR1Q8IX12 1150 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 ACER1Q8TDN7 264 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 ARMC5Q96C12 935 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 ZNF333Q96JL9 665 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
GTF3C1-206ENST00000566779 C19orf81C9J6K1 198 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 SMIM22K7EJ46 135 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 GNRH1P01148 92 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 APPP05067 770 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 ELNP15502 786 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 EN2P19622 333 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 PRMT2P55345 433 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 TATDN1Q6P1N9 297 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 COA7Q96BR5 231 aa12.14□□□□□ -0.47
GTF3C1-206ENST00000566779 TTC41PQ6P2S7 1318 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 MINDY4BA8MYZ0 360 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L21D6R901 530 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 M0R2C6 588 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 RNF113AO15541 343 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 AKR1B1P15121 316 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 GRK4P32298 578 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms