RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
SPG7-213ENST00000566221 IGKV6D-41A0A0C4DH26 115 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 ERICH2A1L162 156 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 JAG1P78504 1218 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 SEPT2Q15019 361 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 RABEP1Q15276 862 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 SHROOM1Q2M3G4 852 aaPredicted RBP17.41■□□□□ 0.38
SPG7-213ENST00000566221 LDLRAD1Q5T700 205 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
SPG7-213ENST00000566221 MOB2Q70IA6 237 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 IL27Q8NEV9 243 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 TMEM87BQ96K49 555 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 ZSCAN10Q96SZ4 725 aaPredicted RBP17.41■□□□□ 0.38
SPG7-213ENST00000566221 KANSL2Q9H9L4 492 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 SNCAIPQ9Y6H5 919 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 TNKSO95271 1327 aa17.41■□□□□ 0.38
SPG7-213ENST00000566221 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
SPG7-213ENST00000566221 UBE2Q2LH0YL09 131 aa17.4■□□□□ 0.38
SPG7-213ENST00000566221 IFIT3O14879 490 aaKnown RBP17.4■□□□□ 0.38
SPG7-213ENST00000566221 CPA1P15085 419 aa17.4■□□□□ 0.38
SPG7-213ENST00000566221 GUCY1A2P33402 732 aa17.4■□□□□ 0.38
SPG7-213ENST00000566221 EXOSC10Q01780 885 aaKnown RBP17.4■□□□□ 0.38
SPG7-213ENST00000566221 ICA1Q05084 483 aa17.4■□□□□ 0.38
SPG7-213ENST00000566221 COL9A3Q14050 684 aaPredicted RBP17.4■□□□□ 0.38
SPG7-213ENST00000566221 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
SPG7-213ENST00000566221 CEP95Q96GE4 821 aa17.4■□□□□ 0.38
SPG7-213ENST00000566221 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPG7-213ENST00000566221 TBC1D2Q9BYX2 928 aa17.4■□□□□ 0.38
SPG7-213ENST00000566221 USP17L5A8MUK1 530 aa17.39■□□□□ 0.37
SPG7-213ENST00000566221 NMT2O60551 498 aa17.39■□□□□ 0.37
SPG7-213ENST00000566221 CTCFP49711 727 aaPredicted RBP17.39■□□□□ 0.37
SPG7-213ENST00000566221 TMEM67Q5HYA8 995 aa17.39■□□□□ 0.37
SPG7-213ENST00000566221 CHST3Q7LGC8 479 aa17.39■□□□□ 0.37
SPG7-213ENST00000566221 ENAHQ8N8S7 591 aaPredicted RBP17.39■□□□□ 0.37
SPG7-213ENST00000566221 ZKSCAN3Q9BRR0 538 aa17.39■□□□□ 0.37
SPG7-213ENST00000566221 IL17RBQ9NRM6 502 aa17.39■□□□□ 0.37
SPG7-213ENST00000566221 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
SPG7-213ENST00000566221 MTMR4Q9NYA4 1195 aa17.39■□□□□ 0.37
SPG7-213ENST00000566221 TMEM88BA6NKF7 163 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 SH2B2O14492 632 aaPredicted RBP17.38■□□□□ 0.37
SPG7-213ENST00000566221 TTLL1O95922 423 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 PTPRAP18433 802 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 NEK4P51957 841 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 FGD1P98174 961 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 WTAPQ15007 396 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 SEC23AQ15436 765 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 DGKHQ86XP1 1220 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 CLEC10AQ8IUN9 316 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 CLMNQ96JQ2 1002 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 TCEANC2Q96MN5 208 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 TTC14Q96N46 770 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 SH2D4AQ9H788 454 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 ELP3Q9H9T3 547 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 AS3MTQ9HBK9 375 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 ARHGEF10LQ9HCE6 1279 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 PDRG1Q9NUG6 133 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 NYAP2Q9P242 653 aa17.38■□□□□ 0.37
SPG7-213ENST00000566221 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.38■□□□□ 0.37
SPG7-213ENST00000566221 SPDYE5A6NIY4 337 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 NOVP48745 357 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 HUNKP57058 714 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 IFIT1BQ5T764 474 aaKnown RBP17.37■□□□□ 0.37
SPG7-213ENST00000566221 ERO1BQ86YB8 467 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 FBXL16Q8N461 479 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 LRRC2Q9BYS8 371 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 LY9Q9HBG7 655 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 SYNPO2Q9UMS6 1093 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 STX8Q9UNK0 236 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 TLL2Q9Y6L7 1015 aa17.37■□□□□ 0.37
SPG7-213ENST00000566221 PARP14Q460N5 1801 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 ST18O60284 1047 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 TOP1P11387 765 aaKnown RBP17.36■□□□□ 0.37
SPG7-213ENST00000566221 EEF2P13639 858 aaKnown RBP17.36■□□□□ 0.37
SPG7-213ENST00000566221 LIFRP42702 1097 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 ATP2B2Q01814 1243 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 PPATQ06203 517 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 RCSD1Q6JBY9 416 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 Q6ZUG5 572 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 SAPCD2Q86UD0 394 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 TMTC2Q8N394 836 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 ANKS1AQ92625 1134 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 SLC10A4Q96EP9 437 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 ABHD8Q96I13 439 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 AGXT2Q9BYV1 514 aa17.36■□□□□ 0.37
SPG7-213ENST00000566221 ALDH8A1Q9H2A2 487 aaPredicted RBP17.36■□□□□ 0.37
SPG7-213ENST00000566221 LBX1P52954 281 aa17.35■□□□□ 0.37
SPG7-213ENST00000566221 PPIL2Q13356 520 aa17.35■□□□□ 0.37
SPG7-213ENST00000566221 ANKRD1Q15327 319 aa17.35■□□□□ 0.37
SPG7-213ENST00000566221 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
SPG7-213ENST00000566221 OTUD5Q96G74 571 aa17.35■□□□□ 0.37
SPG7-213ENST00000566221 FEZ1Q99689 392 aa17.35■□□□□ 0.37
SPG7-213ENST00000566221 KAT14Q9H8E8 782 aa17.35■□□□□ 0.37
SPG7-213ENST00000566221 CLIP2Q9UDT6 1046 aa17.35■□□□□ 0.37
SPG7-213ENST00000566221 ABT1Q9ULW3 272 aaKnown RBP17.35■□□□□ 0.37
SPG7-213ENST00000566221 MYH6P13533 1939 aa17.35■□□□□ 0.37
SPG7-213ENST00000566221 CCDC69A6NI79 296 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
SPG7-213ENST00000566221 MLLT1Q03111 559 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms