RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MCCP23508 829 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 EXOSC10Q01780 885 aaKnown RBP14.88□□□□□ -0.03
SF3B3-206ENST00000565990 RRP12Q5JTH9 1297 aaKnown RBP14.88□□□□□ -0.03
SF3B3-206ENST00000565990 NEK1Q96PY6 1258 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 ELP3Q9H9T3 547 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 NYAP2Q9P242 653 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 ABT1Q9ULW3 272 aaKnown RBP14.88□□□□□ -0.03
SF3B3-206ENST00000565990 KCNH4Q9UQ05 1017 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 ZHX2Q9Y6X8 837 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 PTPRFP10586 1907 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 FAM155AB1AL88 458 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-206ENST00000565990 CXCL11O14625 94 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 HMGB1P09429 215 aaKnown RBP14.87□□□□□ -0.03
SF3B3-206ENST00000565990 ZBTB48P10074 688 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-206ENST00000565990 GJA5P36382 358 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 ZNF157P51786 506 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-206ENST00000565990 COL9A3Q14050 684 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-206ENST00000565990 SPRYD7Q5W111 196 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 CYB5R4Q7L1T6 521 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 DHX32Q7L7V1 743 aaKnown RBP14.87□□□□□ -0.03
SF3B3-206ENST00000565990 DGKHQ86XP1 1220 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 FBXL16Q8N461 479 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 IGDCC4Q8TDY8 1250 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 OPTNQ96CV9 577 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 WNK4Q96J92 1243 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 C22orf23Q9BZE7 217 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 TOMM22Q9NS69 142 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-206ENST00000565990 SYNPO2Q9UMS6 1093 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 WDR19Q8NEZ3 1342 aa14.87□□□□□ -0.03
SF3B3-206ENST00000565990 A0A1W2PRG0 241 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 MPHOSPH10O00566 681 aaKnown RBP14.86□□□□□ -0.03
SF3B3-206ENST00000565990 IRF6O14896 467 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 SLC10A3P09131 477 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 EEF2P13639 858 aaKnown RBP14.86□□□□□ -0.03
SF3B3-206ENST00000565990 PSMA5P28066 241 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 MCM5P33992 734 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 ANTXR2P58335 489 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 PPIL2Q13356 520 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 RAB3GAP1Q15042 981 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 SEC23AQ15436 765 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 CCDC178Q5BJE1 867 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 PPP4R3BQ5MIZ7 849 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 RCSD1Q6JBY9 416 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 IQCA1Q86XH1 822 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 ZNF280CQ8ND82 737 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 CEP95Q96GE4 821 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 ZSCAN10Q96SZ4 725 aaPredicted RBP14.86□□□□□ -0.03
SF3B3-206ENST00000565990 KIF2CQ99661 725 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 AS3MTQ9HBK9 375 aa14.86□□□□□ -0.03
SF3B3-206ENST00000565990 TESPA1A2RU30 521 aaPredicted RBP14.85□□□□□ -0.03
SF3B3-206ENST00000565990 C19orf81C9J6K1 198 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 NMT2O60551 498 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 TTLL1O95922 423 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 SPP2Q13103 211 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 NFKBIBQ15653 356 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 SH3D19Q5HYK7 790 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 RALYLQ86SE5 291 aaKnown RBP14.85□□□□□ -0.03
SF3B3-206ENST00000565990 RASAL3Q86YV0 1011 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 MS4A4AQ96JQ5 239 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 TBC1D32Q96NH3 1257 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 TMX2Q9Y320 296 aa14.85□□□□□ -0.03
SF3B3-206ENST00000565990 USP17L10C9JJH3 530 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 ECE1P42892 770 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 BACE1P56817 501 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 RUFY3Q7L099 469 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 CCDC84Q86UT8 332 aaPredicted RBP14.84□□□□□ -0.03
SF3B3-206ENST00000565990 ACER1Q8TDN7 264 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 OTUD5Q96G74 571 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 TMEM87BQ96K49 555 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 JAKMIP1Q96N16 626 aaKnown RBP14.84□□□□□ -0.03
SF3B3-206ENST00000565990 KIAA1683Q9H0B3 1180 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 ALDH8A1Q9H2A2 487 aaPredicted RBP14.84□□□□□ -0.03
SF3B3-206ENST00000565990 CLIP2Q9UDT6 1046 aa14.84□□□□□ -0.03
SF3B3-206ENST00000565990 LIFRP42702 1097 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 INHBEP58166 350 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 ICA1Q05084 483 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 MOGSQ13724 837 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 CHST3Q7LGC8 479 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 TMTC2Q8N394 836 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 ENAHQ8N8S7 591 aaPredicted RBP14.83□□□□□ -0.04
SF3B3-206ENST00000565990 IL27Q8NEV9 243 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 TMEM47Q9BQJ4 181 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 ZKSCAN3Q9BRR0 538 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 AGXT2Q9BYV1 514 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 ARHGEF10LQ9HCE6 1279 aa14.83□□□□□ -0.04
SF3B3-206ENST00000565990 A0A0G2JLL6 359 aaPredicted RBP14.82□□□□□ -0.04
SF3B3-206ENST00000565990 PRC1O43663 620 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 RPS6KB1P23443 525 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 TM4SF4P48230 202 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 GTF2A2P52657 109 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 HTRA3P83110 453 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 CYP4F22Q6NT55 531 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 BLOC1S2Q6QNY1 142 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 PRRT2Q7Z6L0 340 aaPredicted RBP14.82□□□□□ -0.04
SF3B3-206ENST00000565990 CLEC10AQ8IUN9 316 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms