RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 RDH13Q8NBN7 331 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 TTC8Q8TAM2 541 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 TNIP3Q96KP6 325 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 ZFRQ96KR1 1074 aaKnown RBP3.59□□□□□ -1.83
CHD9-216ENST00000565803 CSRNP2Q9H175 543 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 MCM8Q9UJA3 840 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 NOD1Q9Y239 953 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 AKAP2Q9Y2D5 859 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 ZNF644Q9H582 1327 aaPredicted RBP3.59□□□□□ -1.83
CHD9-216ENST00000565803 NSD2O96028 1365 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 USP6P35125 1406 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 NFAT5O94916 1531 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 hCG_1642624A0A1W2PR95 340 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 A6NCN8 305 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 TRIM64A6NGJ6 449 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 TRIM64BA6NI03 449 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 FAM196BA6NMK8 535 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 SFI1A8K8P3 1242 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 MTA2O94776 668 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 MMP16P51512 607 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 MLC1Q15049 377 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 TKFCQ3LXA3 575 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 MMS22LQ6ZRQ5 1243 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 ZBTB46Q86UZ6 589 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 SEZ6LQ9BYH1 1024 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 FAM126AQ9BYI3 521 aaPredicted RBP3.59□□□□□ -1.83
CHD9-216ENST00000565803 DNAJC25Q9H1X3 360 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 PRPF40AO75400 957 aaKnown RBP3.59□□□□□ -1.84
CHD9-216ENST00000565803 INMTO95050 263 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 ASMTLO95671 621 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 IL33O95760 270 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 F12P00748 615 aaPredicted RBP3.59□□□□□ -1.84
CHD9-216ENST00000565803 RPN1P04843 607 aaKnown RBP3.59□□□□□ -1.84
CHD9-216ENST00000565803 EPHB1P54762 984 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 NR6A1Q15406 480 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 PLA2G4EQ3MJ16 856 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 PLEKHG4Q58EX7 1191 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 ISM2Q6H9L7 571 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 ZNF449Q6P9G9 518 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 RNF135Q8IUD6 432 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 KIAA1958Q8N8K9 716 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 TPCN2Q8NHX9 752 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 CHAC2Q8WUX2 184 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 IPCEF1Q8WWN9 437 aaPredicted RBP3.59□□□□□ -1.84
CHD9-216ENST00000565803 NUDT16L1Q9BRJ7 211 aaKnown RBP3.59□□□□□ -1.84
CHD9-216ENST00000565803 ANKRD30AQ9BXX3 1397 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 XPO4Q9C0E2 1151 aaKnown RBP3.59□□□□□ -1.84
CHD9-216ENST00000565803 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.59□□□□□ -1.849e-7■■■■□ 21.2
CHD9-216ENST00000565803 NIF3L1Q9GZT8 377 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 METTL5Q9NRN9 209 aaKnown RBP3.59□□□□□ -1.84
CHD9-216ENST00000565803 CLIC5Q9NZA1 410 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 DDX41Q9UJV9 622 aaKnown RBP3.59□□□□□ -1.84
CHD9-216ENST00000565803 ZNF180Q9UJW8 692 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 EFR3BQ9Y2G0 817 aa3.59□□□□□ -1.84
CHD9-216ENST00000565803 PNMA6FA0A0J9YX94 578 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 C6orf229H3BNL8 230 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 CA12O43570 354 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 FGAP02671 866 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 KRT10P13645 584 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 MZF1P28698 734 aaPredicted RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 ETFBP38117 255 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 GPSM2P81274 684 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 SEPT6Q14141 434 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 PTPN14Q15678 1187 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 C8orf34Q49A92 452 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 IQCA1Q86XH1 822 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 IFNL3Q8IZI9 196 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 GPRASP2Q96D09 838 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 GTPBP4Q9BZE4 634 aaKnown RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 SH3GLB2Q9NR46 395 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 DIAPH3Q9NSV4 1193 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 SLC45A1Q9Y2W3 748 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 PPP2R3BQ9Y5P8 575 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 FAM205CA6NFA0 338 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 PIP5K1CO60331 668 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 MBD4O95243 580 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 RASGRP1O95267 797 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 VARSP26640 1264 aaKnown RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 RENBPP51606 427 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 APOBRQ0VD83 1088 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 STRN3Q13033 797 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 PPP2R5EQ16537 467 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 CDC37Q16543 378 aaPredicted RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 TXNRD1Q16881 649 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 MTERF2Q49AM1 385 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 HABP4Q5JVS0 413 aaKnown RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 CCDC158Q5M9N0 1113 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 JAKMIP3Q5VZ66 844 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 TRIM68Q6AZZ1 485 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 BRICD5Q6PL45 260 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 THSD4Q6ZMP0 1018 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 MORC1Q86VD1 984 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 TEX11Q8IYF3 940 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 TCP11L2Q8N4U5 519 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 DDX17Q92841 729 aaKnown RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 FEZ1Q99689 392 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 LEMD3Q9Y2U8 911 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 MINDY4BA8MYZ0 360 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 AKAP10O43572 662 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 ORC4O43929 436 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms