RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 KIAA1683Q9H0B3 1180 aa14.72□□□□□ -0.05
SPG7-211ENST00000565370 ARHGEF10LQ9HCE6 1279 aa14.72□□□□□ -0.05
SPG7-211ENST00000565370 STAP2Q9UGK3 403 aa14.72□□□□□ -0.05
SPG7-211ENST00000565370 PTCH2Q9Y6C5 1203 aa14.72□□□□□ -0.05
SPG7-211ENST00000565370 RBBP6Q7Z6E9 1792 aaKnown RBP14.72□□□□□ -0.05
SPG7-211ENST00000565370 ROBO3Q96MS0 1386 aa14.72□□□□□ -0.05
SPG7-211ENST00000565370 TNPO2O14787 897 aaKnown RBP14.71□□□□□ -0.05
SPG7-211ENST00000565370 ECM2O94769 699 aaPredicted RBP14.71□□□□□ -0.05
SPG7-211ENST00000565370 APPP05067 770 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 B4GALNT3Q6L9W6 998 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 C16orf86Q6ZW13 317 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 SLC44A5Q8NCS7 719 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 RAET1EQ8TD07 263 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 ARMC5Q96C12 935 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 TRIM47Q96LD4 638 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 ZNF287Q9HBT7 754 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 SRRDQ9UH36 339 aa14.71□□□□□ -0.05
SPG7-211ENST00000565370 M0R2C6 588 aa14.7□□□□□ -0.06
SPG7-211ENST00000565370 HOXA7P31268 230 aaPredicted RBP14.7□□□□□ -0.06
SPG7-211ENST00000565370 ICA1Q05084 483 aa14.7□□□□□ -0.06
SPG7-211ENST00000565370 SEPT2Q15019 361 aa14.7□□□□□ -0.06
SPG7-211ENST00000565370 SBK1Q52WX2 424 aa14.7□□□□□ -0.06
SPG7-211ENST00000565370 CTR9Q6PD62 1173 aa14.7□□□□□ -0.06
SPG7-211ENST00000565370 CHD1LQ86WJ1 897 aa14.7□□□□□ -0.06
SPG7-211ENST00000565370 DYNLL2Q96FJ2 89 aa14.7□□□□□ -0.06
SPG7-211ENST00000565370 CYP2D7A0A087X1C5 515 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 GSG1L2A8MUP6 293 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 VCAM1P19320 739 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 CDK8P49336 464 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 HERVK_113P62684 666 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 CAP1Q01518 475 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 EVX2Q03828 476 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 ZMYM1Q5SVZ6 1142 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 TICAM2Q86XR7 235 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 COA7Q96BR5 231 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 NAPBQ9H115 298 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 EPB41L4AQ9HCS5 686 aaPredicted RBP14.69□□□□□ -0.06
SPG7-211ENST00000565370 EMILIN3Q9NT22 766 aa14.69□□□□□ -0.06
SPG7-211ENST00000565370 MINDY4BA8MYZ0 360 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 TRIM6-TRIM34B2RNG4 842 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L15C9J2P7 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L13C9JLJ4 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L11C9JVI0 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L18D6R9N7 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L22D6RA61 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L17D6RBQ6 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L19D6RCP7 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L20D6RJB6 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 SLC3A2P08195 630 aaKnown RBP14.68□□□□□ -0.06
SPG7-211ENST00000565370 AKR1B1P15121 316 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 NUCB1Q02818 461 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 USP17L24Q0WX57 530 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 CCAR1Q8IX12 1150 aaKnown RBP14.68□□□□□ -0.06
SPG7-211ENST00000565370 ZNF333Q96JL9 665 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 TMEM106CQ9BVX2 250 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 MKNK2Q9HBH9 465 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 MORF4L1Q9UBU8 362 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 HTTP42858 3142 aa14.68□□□□□ -0.06
SPG7-211ENST00000565370 GREB1LQ9C091 1923 aaPredicted RBP14.67□□□□□ -0.06
SPG7-211ENST00000565370 PATL2C9JE40 543 aaKnown RBP14.67□□□□□ -0.06
SPG7-211ENST00000565370 IGHDP01880 384 aa14.67□□□□□ -0.06
SPG7-211ENST00000565370 CTGFP29279 349 aa14.67□□□□□ -0.06
SPG7-211ENST00000565370 GUCY1A2P33402 732 aa14.67□□□□□ -0.06
SPG7-211ENST00000565370 PRKCZQ05513 592 aa14.67□□□□□ -0.06
SPG7-211ENST00000565370 SLAIN1Q8ND83 568 aa14.67□□□□□ -0.06
SPG7-211ENST00000565370 ACER1Q8TDN7 264 aa14.67□□□□□ -0.06
SPG7-211ENST00000565370 LPAR1Q92633 364 aa14.67□□□□□ -0.06
SPG7-211ENST00000565370 CWC22Q9HCG8 908 aaKnown RBP14.67□□□□□ -0.06
SPG7-211ENST00000565370 GRK4P32298 578 aa14.66□□□□□ -0.06
SPG7-211ENST00000565370 MFAP1P55081 439 aaKnown RBP14.66□□□□□ -0.06
SPG7-211ENST00000565370 IRX6P78412 446 aaPredicted RBP14.66□□□□□ -0.06
SPG7-211ENST00000565370 IFNL3Q8IZI9 196 aa14.66□□□□□ -0.06
SPG7-211ENST00000565370 GPRC5AQ8NFJ5 357 aa14.66□□□□□ -0.06
SPG7-211ENST00000565370 RILPL2Q969X0 211 aa14.66□□□□□ -0.06
SPG7-211ENST00000565370 SEC62Q99442 399 aaKnown RBP14.66□□□□□ -0.06
SPG7-211ENST00000565370 PAGR1Q9BTK6 254 aa14.66□□□□□ -0.06
SPG7-211ENST00000565370 TANGO6Q9C0B7 1094 aa14.66□□□□□ -0.06
SPG7-211ENST00000565370 RPAP3Q9H6T3 665 aaPredicted RBP14.66□□□□□ -0.06
SPG7-211ENST00000565370 KANSL2Q9H9L4 492 aa14.66□□□□□ -0.06
SPG7-211ENST00000565370 HELLSQ9NRZ9 838 aa14.66□□□□□ -0.06
SPG7-211ENST00000565370 UBXN2AP68543 259 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 CCNA1P78396 465 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 ATP2B2Q01814 1243 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 PDE4BQ07343 736 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 SH3TC2Q8TF17 1288 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 SOCS4Q8WXH5 440 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 P2RX7Q99572 595 aaKnown RBP14.65□□□□□ -0.06
SPG7-211ENST00000565370 OSBPL3Q9H4L5 887 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 GOPCQ9HD26 462 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 BIN2Q9UBW5 565 aaPredicted RBP14.65□□□□□ -0.06
SPG7-211ENST00000565370 A0A0G2JMZ2 1700 aa14.65□□□□□ -0.06
SPG7-211ENST00000565370 MAPK4P31152 587 aa14.64□□□□□ -0.07
SPG7-211ENST00000565370 FLT3LGP49771 235 aa14.64□□□□□ -0.07
SPG7-211ENST00000565370 ERVK-9P63128 1117 aa14.64□□□□□ -0.07
SPG7-211ENST00000565370 ERVK-24P63145 666 aa14.64□□□□□ -0.07
SPG7-211ENST00000565370 IRF5Q13568 498 aa14.64□□□□□ -0.07
SPG7-211ENST00000565370 CATSPERGQ6ZRH7 1159 aa14.64□□□□□ -0.07
SPG7-211ENST00000565370 ZNF444Q8N0Y2 327 aaPredicted RBP14.64□□□□□ -0.07
SPG7-211ENST00000565370 STK11IPQ8N1F8 1099 aa14.64□□□□□ -0.07
SPG7-211ENST00000565370 VCPKMTQ9H867 229 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms