RNA–Protein interactions for RNA: ENST00000564131.1

RRN3-206, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 1 (best) BASIC

Gene RRN3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-206ENST00000564131 SHROOM1Q2M3G4 852 aaPredicted RBP13.23□□□□□ -0.29
RRN3-206ENST00000564131 FAM109BQ6ICB4 259 aaPredicted RBP13.23□□□□□ -0.29
RRN3-206ENST00000564131 UBE2OQ9C0C9 1292 aaKnown RBP13.23□□□□□ -0.29
RRN3-206ENST00000564131 KIAA1683Q9H0B3 1180 aa13.23□□□□□ -0.29
RRN3-206ENST00000564131 SLC15A5A6NIM6 579 aa13.22□□□□□ -0.29
RRN3-206ENST00000564131 PEX10O60683 326 aa13.22□□□□□ -0.29
RRN3-206ENST00000564131 GH2P01242 217 aa13.22□□□□□ -0.29
RRN3-206ENST00000564131 IGHA2P01877 340 aa13.22□□□□□ -0.29
RRN3-206ENST00000564131 CCND3P30281 292 aaPredicted RBP13.22□□□□□ -0.29
RRN3-206ENST00000564131 CCL14Q16627 93 aa13.22□□□□□ -0.29
RRN3-206ENST00000564131 MFSD14CQ5VZR4 134 aa13.22□□□□□ -0.29
RRN3-206ENST00000564131 CATSPERGQ6ZRH7 1159 aa13.22□□□□□ -0.29
RRN3-206ENST00000564131 EDC3Q96F86 508 aaKnown RBP13.22□□□□□ -0.29
RRN3-206ENST00000564131 SERPINB13Q9UIV8 391 aa13.22□□□□□ -0.29
RRN3-206ENST00000564131 CDH23Q9H251 3354 aa13.21□□□□□ -0.29
RRN3-206ENST00000564131 POTEB2H3BUK9 544 aa13.21□□□□□ -0.29
RRN3-206ENST00000564131 CNMDO75829 334 aa13.21□□□□□ -0.29
RRN3-206ENST00000564131 PTPREP23469 700 aa13.21□□□□□ -0.29
RRN3-206ENST00000564131 ZAP70P43403 619 aa13.21□□□□□ -0.29
RRN3-206ENST00000564131 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
RRN3-206ENST00000564131 TTC6Q86TZ1 520 aa13.21□□□□□ -0.29
RRN3-206ENST00000564131 PAGR1Q9BTK6 254 aa13.21□□□□□ -0.29
RRN3-206ENST00000564131 PIH1D3Q9NQM4 214 aaKnown RBP13.21□□□□□ -0.29
RRN3-206ENST00000564131 DBNLQ9UJU6 430 aaKnown RBP13.21□□□□□ -0.29
RRN3-206ENST00000564131 CCER2I3L3R5 266 aa13.2□□□□□ -0.3
RRN3-206ENST00000564131 VCAM1P19320 739 aa13.2□□□□□ -0.3
RRN3-206ENST00000564131 CYP7A1P22680 504 aa13.2□□□□□ -0.3
RRN3-206ENST00000564131 DYNLL1P63167 89 aaKnown RBP13.2□□□□□ -0.3
RRN3-206ENST00000564131 GRB14Q14449 540 aa13.2□□□□□ -0.3
RRN3-206ENST00000564131 LPAR1Q92633 364 aa13.2□□□□□ -0.3
RRN3-206ENST00000564131 DDX20Q9UHI6 824 aaKnown RBP13.2□□□□□ -0.3
RRN3-206ENST00000564131 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
RRN3-206ENST00000564131 DNM1LO00429 736 aa13.19□□□□□ -0.3
RRN3-206ENST00000564131 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
RRN3-206ENST00000564131 BCAR3O75815 825 aa13.19□□□□□ -0.3
RRN3-206ENST00000564131 OS9Q13438 667 aaPredicted RBP13.19□□□□□ -0.3
RRN3-206ENST00000564131 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
RRN3-206ENST00000564131 Q7L0L9 218 aa13.19□□□□□ -0.3
RRN3-206ENST00000564131 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
RRN3-206ENST00000564131 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
RRN3-206ENST00000564131 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
RRN3-206ENST00000564131 ZNF236Q9UL36 1845 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 RLFQ13129 1914 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 STRNO43815 780 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 GABPAQ06546 454 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 ZKSCAN2Q63HK3 967 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 OLFML2BQ68BL8 750 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
RRN3-206ENST00000564131 FEZ1Q99689 392 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
RRN3-206ENST00000564131 CABP5Q9NP86 173 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 BTBD7Q9P203 1132 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 IVNS1ABPQ9Y6Y0 642 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 TTC28Q96AY4 2481 aa13.18□□□□□ -0.3
RRN3-206ENST00000564131 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
RRN3-206ENST00000564131 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
RRN3-206ENST00000564131 SHMT1P34896 483 aa13.17□□□□□ -0.3
RRN3-206ENST00000564131 USP5P45974 858 aa13.17□□□□□ -0.3
RRN3-206ENST00000564131 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
RRN3-206ENST00000564131 ATP2B2Q01814 1243 aa13.17□□□□□ -0.3
RRN3-206ENST00000564131 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
RRN3-206ENST00000564131 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
RRN3-206ENST00000564131 MAGEB6Q8N7X4 407 aa13.17□□□□□ -0.3
RRN3-206ENST00000564131 SHCBP1Q8NEM2 672 aa13.17□□□□□ -0.3
RRN3-206ENST00000564131 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
RRN3-206ENST00000564131 RIOK1Q9BRS2 568 aaKnown RBP13.17□□□□□ -0.3
RRN3-206ENST00000564131 SENP6Q9GZR1 1112 aaPredicted RBP13.17□□□□□ -0.3
RRN3-206ENST00000564131 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 CYBAP13498 195 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 GUCY1A2P33402 732 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 PLCD1P51178 756 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 COG2Q14746 738 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 MIGA1Q8NAN2 632 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 ARRDC4Q8NCT1 418 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 NPLOC4Q8TAT6 608 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
RRN3-206ENST00000564131 CCDC8Q9H0W5 538 aaPredicted RBP13.16□□□□□ -0.3
RRN3-206ENST00000564131 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
RRN3-206ENST00000564131 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
RRN3-206ENST00000564131 SNX17Q15036 470 aa13.15□□□□□ -0.3
RRN3-206ENST00000564131 ZYXQ15942 572 aaKnown RBP13.15□□□□□ -0.3
RRN3-206ENST00000564131 C1orf53Q5VUE5 145 aa13.15□□□□□ -0.3
RRN3-206ENST00000564131 ABRAQ8N0Z2 381 aa13.15□□□□□ -0.3
RRN3-206ENST00000564131 MB21D1Q8N884 522 aa13.15□□□□□ -0.3
RRN3-206ENST00000564131 TRPV1Q8NER1 839 aa13.15□□□□□ -0.3
RRN3-206ENST00000564131 RPAP3Q9H6T3 665 aaPredicted RBP13.15□□□□□ -0.3
RRN3-206ENST00000564131 PRKAG2Q9UGJ0 569 aa13.15□□□□□ -0.3
RRN3-206ENST00000564131 A0A0G2JMZ2 1700 aa13.15□□□□□ -0.3
RRN3-206ENST00000564131 PRUNE2Q8WUY3 3088 aa13.15□□□□□ -0.3
RRN3-206ENST00000564131 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
RRN3-206ENST00000564131 SEPT4O43236 478 aa13.14□□□□□ -0.31
RRN3-206ENST00000564131 CYP2C19P33261 490 aa13.14□□□□□ -0.31
RRN3-206ENST00000564131 TTF1Q15361 905 aaPredicted RBP13.14□□□□□ -0.31
RRN3-206ENST00000564131 WDR78Q5VTH9 848 aa13.14□□□□□ -0.31
RRN3-206ENST00000564131 ERC1Q8IUD2 1116 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms