RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 BAZ2BQ9UIF8 2168 aaKnown RBP13.39□□□□□ -0.27
ABCA3-203ENST00000563623 C5P01031 1676 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 H3BQF6 201 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 KRT9P35527 623 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 CRACR2BQ8N4Y2 399 aaPredicted RBP13.38□□□□□ -0.27
ABCA3-203ENST00000563623 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
ABCA3-203ENST00000563623 CCDC151A5D8V7 595 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 ATP8B1O43520 1251 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 IL2RBP14784 551 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 MCM7P33993 719 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 LIFRP42702 1097 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 BCAMP50895 628 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 NR1I3Q14994 352 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 BRD3Q15059 726 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 KIFC2Q96AC6 838 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 NAPGQ99747 312 aaPredicted RBP13.38□□□□□ -0.27
ABCA3-203ENST00000563623 FAN1Q9Y2M0 1017 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
ABCA3-203ENST00000563623 KRT2P35908 639 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 MDM2Q00987 491 aaPredicted RBP13.38□□□□□ -0.27
ABCA3-203ENST00000563623 TICAM2Q86XR7 235 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 GPIHBP1Q8IV16 184 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 CNGA4Q8IV77 575 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 CTAGE1Q96RT6 745 aa13.38□□□□□ -0.27
ABCA3-203ENST00000563623 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
ABCA3-203ENST00000563623 ENC1O14682 589 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 N4BP1O75113 896 aaKnown RBP13.37□□□□□ -0.27
ABCA3-203ENST00000563623 ZNF18P17022 549 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 FXR1P51114 621 aaKnown RBP eCLIP13.37□□□□□ -0.27
ABCA3-203ENST00000563623 UBXN1Q04323 297 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 RASGRF1Q13972 1273 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 PUM3Q15397 648 aaKnown RBP13.37□□□□□ -0.27
ABCA3-203ENST00000563623 RSRC2Q7L4I2 434 aaKnown RBP13.37□□□□□ -0.27
ABCA3-203ENST00000563623 SGMS1Q86VZ5 419 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 PAGE5Q96GU1 130 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 ACTN4O43707 911 aaKnown RBP13.37□□□□□ -0.27
ABCA3-203ENST00000563623 NLRP5P59047 1200 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 NCAPH2Q6IBW4 605 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 KIAA1328Q86T90 577 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 NLRP10Q86W26 655 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 TRIML1Q8N9V2 468 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 RNF41Q9H4P4 317 aaPredicted RBP13.37□□□□□ -0.27
ABCA3-203ENST00000563623 RSPH14Q9UHP6 348 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 ABCC6O95255 1503 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 CYP2D7A0A087X1C5 515 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 ANKRD65E5RJM6 399 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 ERCC5P28715 1186 aaPredicted RBP13.37□□□□□ -0.27
ABCA3-203ENST00000563623 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 LPIN2Q92539 896 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 PNKPQ96T60 521 aa13.37□□□□□ -0.27
ABCA3-203ENST00000563623 TNKSO95271 1327 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 A0A1B0GTH6 734 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 GSG1L2A8MUP6 293 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 MFAP3LO75121 409 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
ABCA3-203ENST00000563623 IFIT1BQ5T764 474 aaKnown RBP13.36□□□□□ -0.27
ABCA3-203ENST00000563623 PANX2Q96RD6 677 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 PLEKHA4Q9H4M7 779 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 TRIM66O15016 1216 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 ABL1P00519 1130 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 GIGYF2Q6Y7W6 1299 aaKnown RBP13.36□□□□□ -0.27
ABCA3-203ENST00000563623 ESR2Q92731 530 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 MED15Q96RN5 788 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 ZMYND10O75800 440 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 EIF5P55010 431 aaKnown RBP13.36□□□□□ -0.27
ABCA3-203ENST00000563623 PIK3AP1Q6ZUJ8 805 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 TMTC2Q8N394 836 aa13.36□□□□□ -0.27
ABCA3-203ENST00000563623 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 A0A087X0B3 334 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 PTGDRQ13258 359 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 NOM1Q5C9Z4 860 aaKnown RBP13.35□□□□□ -0.27
ABCA3-203ENST00000563623 TTC38Q5R3I4 469 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 CCDC148Q8NFR7 591 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 TSPYL1Q9H0U9 437 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 TTF2Q9UNY4 1162 aaKnown RBP13.35□□□□□ -0.27
ABCA3-203ENST00000563623 CSF1RP07333 972 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 VSNL1P62760 191 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
ABCA3-203ENST00000563623 PDE8AO60658 829 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 PLEKHA8P1O95397 391 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 PPARAQ07869 468 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 KRT31Q15323 416 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 EARS2Q5JPH6 523 aaKnown RBP13.34□□□□□ -0.27
ABCA3-203ENST00000563623 RASSF4Q9H2L5 321 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 TRIM10Q9UDY6 481 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 TFR2Q9UP52 801 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 C1orf167Q5SNV9 1468 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 MAP3K15Q6ZN16 1313 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 FAM237AA0A1B0GTK4 181 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 TMTC1Q8IUR5 882 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 NELFBQ8WX92 580 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 NAA15Q9BXJ9 866 aaKnown RBP13.34□□□□□ -0.27
ABCA3-203ENST00000563623 RABEP2Q9H5N1 569 aa13.34□□□□□ -0.27
ABCA3-203ENST00000563623 ADD3Q9UEY8 706 aaKnown RBP13.34□□□□□ -0.27
ABCA3-203ENST00000563623 TACC3Q9Y6A5 838 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms