RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CTNND2Q9UQB3 1225 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 ITGAEP38570 1179 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 TMEM201Q5SNT2 666 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 ERMP1Q7Z2K6 904 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 THAP5Q7Z6K1 395 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 POU5F2Q8N7G0 328 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 CYB5D2Q8WUJ1 264 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 REV1Q9UBZ9 1251 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 CEP131Q9UPN4 1083 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 PRR36Q9H6K5 1346 aa5.99□□□□□ -1.45
HMGB1P33-201ENST00000563485 WASH4PA8MWX3 477 aa5.98□□□□□ -1.45
HMGB1P33-201ENST00000563485 TLR3O15455 904 aaKnown RBP5.98□□□□□ -1.45
HMGB1P33-201ENST00000563485 YBX3P16989 372 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB1P33-201ENST00000563485 YARSP54577 528 aaKnown RBP5.98□□□□□ -1.45
HMGB1P33-201ENST00000563485 MPP2Q14168 576 aa5.98□□□□□ -1.45
HMGB1P33-201ENST00000563485 KLHL3Q9UH77 587 aa5.98□□□□□ -1.45
HMGB1P33-201ENST00000563485 CHURC1-FNTBB4DL54 471 aa5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 DNAJA2O60884 412 aa5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 HTR3BO95264 441 aa5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 MRPL58Q14197 206 aaKnown RBP5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 ZNF326Q5BKZ1 582 aaKnown RBP5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 FBXL19Q6PCT2 694 aa5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 FAM196AQ6ZSG2 479 aa5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 REC114Q7Z4M0 266 aa5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 PIWIL2Q8TC59 973 aaKnown RBP5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 C19orf73Q9NVV2 129 aa5.97□□□□□ -1.45
HMGB1P33-201ENST00000563485 ESR1P03372 595 aa5.96□□□□□ -1.46
HMGB1P33-201ENST00000563485 C8AP07357 584 aa5.96□□□□□ -1.46
HMGB1P33-201ENST00000563485 KCNMB1Q16558 191 aa5.96□□□□□ -1.46
HMGB1P33-201ENST00000563485 FYB2Q5VWT5 728 aa5.96□□□□□ -1.46
HMGB1P33-201ENST00000563485 ZSWIM9Q86XI8 627 aa5.96□□□□□ -1.46
HMGB1P33-201ENST00000563485 SLFN12Q8IYM2 578 aa5.96□□□□□ -1.46
HMGB1P33-201ENST00000563485 BAHD1Q8TBE0 780 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P33-201ENST00000563485 DUSP15Q9H1R2 295 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P33-201ENST00000563485 LRRN2O75325 713 aa5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 EIF4A3P38919 411 aaKnown RBP5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 ZNF648Q5T619 568 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 DTWD2Q8NBA8 298 aa5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 TMEM40Q8WWA1 233 aa5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 ALPK1Q96QP1 1244 aa5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 KCNQ5Q9NR82 932 aa5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 SLAMF8Q9P0V8 285 aa5.95□□□□□ -1.46
HMGB1P33-201ENST00000563485 ZNF503-AS2A6NEH8 195 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 TPP2P29144 1249 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 AFMP43652 599 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 TNNI2P48788 182 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 RALGPS1Q5JS13 557 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 TMPRSS7Q7RTY8 843 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 CREG2Q8IUH2 290 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 PHACTR4Q8IZ21 702 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 RNF141Q8WVD5 230 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 LRRC3Q9BY71 257 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 BRMS1Q9HCU9 246 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 GGT7Q9UJ14 662 aa5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 SUPT16HQ9Y5B9 1047 aaKnown RBP5.94□□□□□ -1.46
HMGB1P33-201ENST00000563485 DNAJC25-GNG10A0A024R161 153 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 GREM1O60565 184 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 SRFP11831 508 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 GDNFP39905 211 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 CRKP46108 304 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 CWF19L2Q2TBE0 894 aaKnown RBP5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 GAB4Q2WGN9 574 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 TMCO4Q5TGY1 634 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 HS2ST1Q7LGA3 356 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 ZNF296Q8WUU4 475 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 LIN37Q96GY3 246 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 KIRREL1Q96J84 757 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 CCDC74BQ96LY2 380 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 KREMEN1Q96MU8 473 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 KIF2CQ99661 725 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 GPR62Q9BZJ7 368 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 ADAMTS1Q9UHI8 967 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 KCNH3Q9ULD8 1083 aa5.93□□□□□ -1.46
HMGB1P33-201ENST00000563485 LRRC10BA6NIK2 292 aa5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 FARP2O94887 1054 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 ZNF16P17020 682 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 LDLRAD1Q5T700 205 aa5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 TTC6Q86TZ1 520 aa5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 TRIT1Q9H3H1 467 aaKnown RBP5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 DUSP13Q9UII6 198 aa5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 TMEM59LQ9UK28 342 aa5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 PCDHB14Q9Y5E9 798 aa5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 ROBO2Q9HCK4 1378 aa5.92□□□□□ -1.46
HMGB1P33-201ENST00000563485 SLC22A31A6NKX4 558 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 GLI1P08151 1106 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 ERVFC1P60507 584 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 ZNF124Q15973 351 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 MLANAQ16655 118 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 ARSHQ5FYA8 562 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 TSPYL5Q86VY4 417 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 CCDC120Q96HB5 630 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 ASPNQ9BXN1 380 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 ADAMTS10Q9H324 1103 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 GPATCH2Q9NW75 528 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 UBP1Q9NZI7 540 aa5.91□□□□□ -1.46
HMGB1P33-201ENST00000563485 SHISA3A0PJX4 238 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms