RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 DDX60LQ5H9U9 1706 aaKnown RBP10.88□□□□□ -0.67
LINC00838-201ENST00000562956 PRPF3O43395 683 aaKnown RBP10.88□□□□□ -0.67
LINC00838-201ENST00000562956 YEATS4O95619 227 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 AKAP17AQ02040 695 aaKnown RBP10.88□□□□□ -0.67
LINC00838-201ENST00000562956 STK38Q15208 465 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 CDC42EP5Q6NZY7 148 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 HHIPL2Q6UWX4 724 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 KIAA0825Q8IV33 1275 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 DIS3L2Q8IYB7 885 aaKnown RBP10.88□□□□□ -0.67
LINC00838-201ENST00000562956 PNMA1Q8ND90 353 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 TEKT1Q969V4 418 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 ZNF287Q9HBT7 754 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 DDX19AQ9NUU7 478 aaKnown RBP10.88□□□□□ -0.67
LINC00838-201ENST00000562956 PCDHAC2Q9Y5I4 1007 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 MYH15Q9Y2K3 1946 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 SPTLC2O15270 562 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 CRKP46108 304 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 KIAA2012Q0VF49 1180 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 NOSTRINQ8IVI9 506 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 KCNG4Q8TDN1 519 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 CLSTN2Q9H4D0 955 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 VPS54Q9P1Q0 977 aa10.88□□□□□ -0.67
LINC00838-201ENST00000562956 CNTNAP5Q8WYK1 1306 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 NR5A1Q13285 461 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 SNW1Q13573 536 aaKnown RBP10.87□□□□□ -0.67
LINC00838-201ENST00000562956 SF3A1Q15459 793 aaKnown RBP10.87□□□□□ -0.67
LINC00838-201ENST00000562956 OXER1Q8TDS5 423 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 TNMDQ9H2S6 317 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 STX8Q9UNK0 236 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 CDK5RAP2Q96SN8 1893 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 KCNA3P22001 575 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 SAFBQ15424 915 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC00838-201ENST00000562956 MAP3K11Q16584 847 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 ADALQ6DHV7 355 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 CKAP2LQ8IYA6 745 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 MAP3K14Q99558 947 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 TMEM47Q9BQJ4 181 aa10.87□□□□□ -0.67
LINC00838-201ENST00000562956 DPEP1P16444 411 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 FKBP1AP62942 108 aaKnown RBP10.86□□□□□ -0.67
LINC00838-201ENST00000562956 NFIAQ12857 509 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 SLC39A14Q15043 492 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 CCDC178Q5BJE1 867 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 STAG2Q8N3U4 1231 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 TTLL6Q8N841 843 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 FSIP1Q8NA03 581 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 ENGASEQ8NFI3 743 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 NEDD1Q8NHV4 660 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 ZDHHC15Q96MV8 337 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
LINC00838-201ENST00000562956 ADAMTSL1Q8N6G6 1762 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 YDJCA8MPS7 323 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 PPIP5K2O43314 1243 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 MARCKSP29966 332 aaPredicted RBP10.86□□□□□ -0.67
LINC00838-201ENST00000562956 KIF5BP33176 963 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 GABPAQ06546 454 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 PTPAQ15257 358 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 PIBF1Q8WXW3 757 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 PHF20Q9BVI0 1012 aa10.86□□□□□ -0.67
LINC00838-201ENST00000562956 A0A1W2PQ27 194 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 A0A1W2PQ64 194 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 A0A1W2PQD8 194 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 VEGFAP15692 232 aaPredicted RBP10.85□□□□□ -0.67
LINC00838-201ENST00000562956 TOB1P50616 345 aaPredicted RBP10.85□□□□□ -0.67
LINC00838-201ENST00000562956 CACNB3P54284 484 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 AXDND1Q5T1B0 1012 aaPredicted RBP10.85□□□□□ -0.67
LINC00838-201ENST00000562956 CCDC73Q6ZRK6 1079 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 RBM43Q6ZSC3 357 aaKnown RBP10.85□□□□□ -0.67
LINC00838-201ENST00000562956 SLC16A10Q8TF71 515 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 OSBPL5Q9H0X9 879 aaPredicted RBP10.85□□□□□ -0.67
LINC00838-201ENST00000562956 MAD2L2Q9UI95 211 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 MTMR7Q9Y216 660 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 A0A1B0GVL5 298 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 FAM160A1Q05DH4 1040 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 GRM4Q14833 912 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 RASGRP2Q7LDG7 609 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 ZFPM1Q8IX07 1006 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 SUPT20HQ8NEM7 779 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 MRPS27Q92552 414 aaKnown RBP10.85□□□□□ -0.67
LINC00838-201ENST00000562956 CEP95Q96GE4 821 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 XBP1P17861 261 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 NDUFA8P51970 172 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00838-201ENST00000562956 SLC35G1Q2M3R5 365 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 MRIQ9BWK5 157 aa10.85□□□□□ -0.67
LINC00838-201ENST00000562956 SCN9AQ15858 1988 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 ZBTB7AO95365 584 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 CCDC192P0DO97 292 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 SLURP2P0DP57 97 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 NPY5RQ15761 445 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 FMR1NBQ8N0W7 255 aaPredicted RBP10.84□□□□□ -0.67
LINC00838-201ENST00000562956 ANP32BQ92688 251 aaKnown RBP10.84□□□□□ -0.67
LINC00838-201ENST00000562956 FAM205CA6NFA0 338 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 SCG2P13521 617 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 TYRO3Q06418 890 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 CCDC173Q0VFZ6 552 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 PFKFB3Q16875 520 aaPredicted RBP10.84□□□□□ -0.67
LINC00838-201ENST00000562956 CCDC93Q567U6 631 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 EARS2Q5JPH6 523 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms