RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 CSRNP1Q96S65 589 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
SPG7-206ENST00000562775 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 MTMR6Q9Y217 621 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 IFNAR1P17181 557 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 KIF4BQ2VIQ3 1234 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 TBC1D10BQ4KMP7 808 aaPredicted RBP16.38■□□□□ 0.21
SPG7-206ENST00000562775 MAP3K14Q99558 947 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
SPG7-206ENST00000562775 ORC3Q9UBD5 711 aaPredicted RBP16.38■□□□□ 0.21
SPG7-206ENST00000562775 HERC5Q9UII4 1024 aaKnown RBP16.38■□□□□ 0.21
SPG7-206ENST00000562775 STX8Q9UNK0 236 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 IGKV6D-41A0A0C4DH26 115 aa16.37■□□□□ 0.21
SPG7-206ENST00000562775 VPS37CA5D8V6 355 aaPredicted RBP16.37■□□□□ 0.21
SPG7-206ENST00000562775 TNFAIP1Q13829 316 aa16.37■□□□□ 0.21
SPG7-206ENST00000562775 GPR162Q16538 588 aa16.37■□□□□ 0.21
SPG7-206ENST00000562775 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
SPG7-206ENST00000562775 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
SPG7-206ENST00000562775 CEP95Q96GE4 821 aa16.37■□□□□ 0.21
SPG7-206ENST00000562775 TMEM47Q9BQJ4 181 aa16.37■□□□□ 0.21
SPG7-206ENST00000562775 FAM196BA6NMK8 535 aa16.36■□□□□ 0.21
SPG7-206ENST00000562775 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
SPG7-206ENST00000562775 SLURP2P0DP57 97 aa16.36■□□□□ 0.21
SPG7-206ENST00000562775 TOP1P11387 765 aaKnown RBP16.36■□□□□ 0.21
SPG7-206ENST00000562775 CERKLQ49MI3 558 aaPredicted RBP16.36■□□□□ 0.21
SPG7-206ENST00000562775 PPP4R3BQ5MIZ7 849 aa16.36■□□□□ 0.21
SPG7-206ENST00000562775 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
SPG7-206ENST00000562775 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
SPG7-206ENST00000562775 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
SPG7-206ENST00000562775 MTMR4Q9NYA4 1195 aa16.36■□□□□ 0.21
SPG7-206ENST00000562775 STK36Q9NRP7 1315 aa16.36■□□□□ 0.21
SPG7-206ENST00000562775 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
SPG7-206ENST00000562775 GRIN3BO60391 1043 aa16.35■□□□□ 0.21
SPG7-206ENST00000562775 F13A1P00488 732 aa16.35■□□□□ 0.21
SPG7-206ENST00000562775 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
SPG7-206ENST00000562775 RGS22Q8NE09 1264 aa16.35■□□□□ 0.21
SPG7-206ENST00000562775 TMEM39BQ9GZU3 492 aa16.35■□□□□ 0.21
SPG7-206ENST00000562775 PGAP2Q9UHJ9 254 aa16.35■□□□□ 0.21
SPG7-206ENST00000562775 H3BQV1 296 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 MPHOSPH10O00566 681 aaKnown RBP16.34■□□□□ 0.21
SPG7-206ENST00000562775 TBC1D12O60347 775 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 DDNO94850 711 aaPredicted RBP16.34■□□□□ 0.21
SPG7-206ENST00000562775 BAG4O95429 457 aaKnown RBP16.34■□□□□ 0.21
SPG7-206ENST00000562775 FMNL1O95466 1100 aaPredicted RBP16.34■□□□□ 0.21
SPG7-206ENST00000562775 KIF5BP33176 963 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 MCM4P33991 863 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 RASA3Q14644 834 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 IFFO2Q5TF58 517 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 TRIM22Q8IYM9 498 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 PHKBQ93100 1093 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPG7-206ENST00000562775 HACL1Q9UJ83 578 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 GRM4Q14833 912 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 TMTC3Q6ZXV5 915 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 CDC37L1Q7L3B6 337 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 ATP6V1DQ9Y5K8 247 aa16.34■□□□□ 0.21
SPG7-206ENST00000562775 TTLL1O95922 423 aa16.33■□□□□ 0.2
SPG7-206ENST00000562775 EPS15P42566 896 aa16.33■□□□□ 0.2
SPG7-206ENST00000562775 GNAQP50148 359 aa16.33■□□□□ 0.2
SPG7-206ENST00000562775 MAP3K10Q02779 954 aa16.33■□□□□ 0.2
SPG7-206ENST00000562775 ABCB5Q2M3G0 1257 aa16.33■□□□□ 0.2
SPG7-206ENST00000562775 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.2
SPG7-206ENST00000562775 WASF1Q92558 559 aa16.33■□□□□ 0.2
SPG7-206ENST00000562775 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.2
SPG7-206ENST00000562775 KANSL2Q9H9L4 492 aa16.33■□□□□ 0.2
SPG7-206ENST00000562775 SOCS7O14512 581 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
SPG7-206ENST00000562775 FUT2Q10981 343 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 TRPM4Q8TD43 1214 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 ALG1Q9BT22 464 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 CLIP2Q9UDT6 1046 aa16.32■□□□□ 0.2
SPG7-206ENST00000562775 ASTN2O75129 1339 aaPredicted RBP16.32■□□□□ 0.2
SPG7-206ENST00000562775 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
SPG7-206ENST00000562775 PLEKHA8P1O95397 391 aa16.31■□□□□ 0.2
SPG7-206ENST00000562775 DEXIO95424 95 aa16.31■□□□□ 0.2
SPG7-206ENST00000562775 APOBEC3FQ8IUX4 373 aaKnown RBP16.31■□□□□ 0.2
SPG7-206ENST00000562775 CDAN1Q8IWY9 1227 aa16.31■□□□□ 0.2
SPG7-206ENST00000562775 CMTR1Q8N1G2 835 aaKnown RBP16.31■□□□□ 0.2
SPG7-206ENST00000562775 FBXO18Q8NFZ0 1043 aa16.31■□□□□ 0.2
SPG7-206ENST00000562775 TEPSINQ96N21 525 aa16.31■□□□□ 0.2
SPG7-206ENST00000562775 NYAP2Q9P242 653 aa16.31■□□□□ 0.2
SPG7-206ENST00000562775 PALM3A6NDB9 673 aaPredicted RBP16.3■□□□□ 0.2
SPG7-206ENST00000562775 DDX11L8A8MPP1 907 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 GOLGA6L22H0YM25 854 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
SPG7-206ENST00000562775 GDF11O95390 407 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
SPG7-206ENST00000562775 NBR1Q14596 966 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 ANGEL2Q5VTE6 544 aaKnown RBP16.3■□□□□ 0.2
SPG7-206ENST00000562775 CLEC10AQ8IUN9 316 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 SRBD1Q8N5C6 995 aaKnown RBP16.3■□□□□ 0.2
SPG7-206ENST00000562775 MKL1Q969V6 931 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 DEFB129Q9H1M3 183 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 ADARB2Q9NS39 739 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms