RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SEMA3EO15041 775 aa11.89□□□□□ -0.51
HERC1-210ENST00000560897 HOXC6P09630 235 aa11.89□□□□□ -0.51
HERC1-210ENST00000560897 FGFR2P21802 821 aa11.89□□□□□ -0.51
HERC1-210ENST00000560897 LRRC41Q15345 812 aa11.89□□□□□ -0.51
HERC1-210ENST00000560897 SLC4A10Q6U841 1118 aa11.89□□□□□ -0.51
HERC1-210ENST00000560897 SLC44A5Q8NCS7 719 aa11.89□□□□□ -0.51
HERC1-210ENST00000560897 TRPV1Q8NER1 839 aa11.89□□□□□ -0.51
HERC1-210ENST00000560897 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.89□□□□□ -0.515e-6■□□□□ 9.4
HERC1-210ENST00000560897 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
HERC1-210ENST00000560897 ABCF2Q9UG63 623 aa11.89□□□□□ -0.51
HERC1-210ENST00000560897 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
HERC1-210ENST00000560897 GRXCR1A8MXD5 290 aa11.88□□□□□ -0.51
HERC1-210ENST00000560897 DCDC2CA8MYV0 355 aa11.88□□□□□ -0.51
HERC1-210ENST00000560897 SMIM22K7EJ46 135 aa11.88□□□□□ -0.51
HERC1-210ENST00000560897 GRB14Q14449 540 aa11.88□□□□□ -0.51
HERC1-210ENST00000560897 SPTY2D1Q68D10 685 aaPredicted RBP11.88□□□□□ -0.51
HERC1-210ENST00000560897 RNF180Q86T96 592 aa11.88□□□□□ -0.51
HERC1-210ENST00000560897 NPLOC4Q8TAT6 608 aa11.88□□□□□ -0.51
HERC1-210ENST00000560897 HERVK_113Q902F9 699 aa11.88□□□□□ -0.51
HERC1-210ENST00000560897 BICC1Q9H694 974 aaKnown RBP11.88□□□□□ -0.51
HERC1-210ENST00000560897 SLC5A4Q9NY91 659 aa11.88□□□□□ -0.51
HERC1-210ENST00000560897 MROH7-TTC4A0A0A0MT08 1334 aa11.87□□□□□ -0.51
HERC1-210ENST00000560897 ERC2O15083 957 aa11.87□□□□□ -0.51
HERC1-210ENST00000560897 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
HERC1-210ENST00000560897 OLFML2BQ68BL8 750 aa11.87□□□□□ -0.51
HERC1-210ENST00000560897 PSRC1Q6PGN9 363 aaPredicted RBP11.87□□□□□ -0.51
HERC1-210ENST00000560897 USP17L2Q6R6M4 530 aa11.87□□□□□ -0.51
HERC1-210ENST00000560897 NKX2-4Q9H2Z4 354 aa11.87□□□□□ -0.51
HERC1-210ENST00000560897 PHF24Q9UPV7 400 aa11.87□□□□□ -0.51
HERC1-210ENST00000560897 TIMP1P01033 207 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 RARBP10826 455 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
HERC1-210ENST00000560897 FAM47AQ5JRC9 791 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 TMEM199Q8N511 208 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 KLHDC4Q8TBB5 520 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 UIMC1Q96RL1 719 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 FEZ1Q99689 392 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 XPNPEP3Q9NQH7 507 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 COG5Q9UP83 839 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
HERC1-210ENST00000560897 PRR33A8MZF0 331 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L15C9J2P7 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L13C9JLJ4 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L11C9JVI0 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L18D6R9N7 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L22D6RA61 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L17D6RBQ6 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L19D6RCP7 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L20D6RJB6 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 MAP4K4O95819 1239 aaPredicted RBP11.85□□□□□ -0.51
HERC1-210ENST00000560897 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
HERC1-210ENST00000560897 USP17L24Q0WX57 530 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
HERC1-210ENST00000560897 ATP2B3Q16720 1220 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 TMEM240Q5SV17 173 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 PPP2R2DQ66LE6 453 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 MFSD5Q6N075 450 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
HERC1-210ENST00000560897 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
HERC1-210ENST00000560897 KAZALD1Q96I82 304 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 TOX2Q96NM4 488 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 STARD7Q9NQZ5 370 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 PI4KBQ9UBF8 816 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 MROH7Q68CQ1 1323 aa11.85□□□□□ -0.51
HERC1-210ENST00000560897 XIRP2A4UGR9 3374 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 GPR75-ASB3A0A0A6YYF3 556 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 A0A1W2PQ45 241 aaPredicted RBP11.84□□□□□ -0.51
HERC1-210ENST00000560897 A0A1W2PQY0 241 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 EYA2O00167 538 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 CNMDO75829 334 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 ADORA2AP29274 412 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 RHBDL3P58872 404 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 GSTO1P78417 241 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 FAAP100Q0VG06 881 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 NOL10Q9BSC4 688 aaKnown RBP11.84□□□□□ -0.51
HERC1-210ENST00000560897 C11orf16Q9NQ32 467 aa11.84□□□□□ -0.51
HERC1-210ENST00000560897 GBF1Q92538 1859 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 PI4K2BG5E9Z4 385 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 STRNO43815 780 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 GDF11O95390 407 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 LDHCP07864 332 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 PHKA1P46020 1223 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 USP14P54578 494 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 NHLH1Q02575 133 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 ZYXQ15942 572 aaKnown RBP11.83□□□□□ -0.52
HERC1-210ENST00000560897 ANKRD33Q7Z3H0 272 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 TEX11Q8IYF3 940 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 DHX36Q9H2U1 1008 aaKnown RBP11.83□□□□□ -0.52
HERC1-210ENST00000560897 EMILIN3Q9NT22 766 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 ZBTB21Q9ULJ3 1066 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
HERC1-210ENST00000560897 PGK1P00558 417 aa11.82□□□□□ -0.52
HERC1-210ENST00000560897 ACRP10323 421 aa11.82□□□□□ -0.52
HERC1-210ENST00000560897 PRAMEF19Q5SWL8 479 aa11.82□□□□□ -0.52
HERC1-210ENST00000560897 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms