RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, human

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHF-208	ENST00000560734	CNTNAP5	Q8WYK1	1306 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	MYH6	P13533	1939 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	BTBD18	B2RXH4	712 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	UBE2Q2L	H0YL09	131 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	NMT2	O60551	498 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	TSPY3	P0CV98	308 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	TSPY8	P0CW00	308 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	PLCD1	P51178	756 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	ZSCAN30	Q86W11	494 aa		28.93	■■■□□ 2.22
SHF-208	ENST00000560734	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.93	■■■□□ 2.22
SHF-208	ENST00000560734	PLEKHA8P1	O95397	391 aa		28.92	■■■□□ 2.22
SHF-208	ENST00000560734	MSL1	Q68DK7	614 aa		28.92	■■■□□ 2.22
SHF-208	ENST00000560734	TIGD1	Q96MW7	591 aa		28.92	■■■□□ 2.22
SHF-208	ENST00000560734		V9GY48	417 aa	Predicted RBP	28.92	■■■□□ 2.22
SHF-208	ENST00000560734	CUTA	O60888	179 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	CDK8	P49336	464 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	GRIPAP1	Q4V328	841 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	CKAP2L	Q8IYA6	745 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	CMTR1	Q8N1G2	835 aa	Known RBP	28.91	■■■□□ 2.22
SHF-208	ENST00000560734	CCDC82	Q8N4S0	544 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	NEDD1	Q8NHV4	660 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	TAOK2	Q9UL54	1235 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	NOV	P48745	357 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	GRM4	Q14833	912 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	EZH2	Q15910	746 aa	Known RBP	28.91	■■■□□ 2.22
SHF-208	ENST00000560734	CERS5	Q8N5B7	392 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	SRBD1	Q8N5C6	995 aa	Known RBP	28.91	■■■□□ 2.22
SHF-208	ENST00000560734	PNMA1	Q8ND90	353 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	LZTS2	Q9BRK4	669 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.91	■■■□□ 2.22
SHF-208	ENST00000560734	KCNJ14	Q9UNX9	436 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734	CEP131	Q9UPN4	1083 aa		28.91	■■■□□ 2.22
SHF-208	ENST00000560734		G3V3G9	751 aa		28.9	■■■□□ 2.22
SHF-208	ENST00000560734	HDLBP	Q00341	1268 aa	Known RBP	28.9	■■■□□ 2.22
SHF-208	ENST00000560734	DCAF8	Q5TAQ9	597 aa		28.9	■■■□□ 2.22
SHF-208	ENST00000560734	DEFB132	Q7Z7B7	95 aa		28.9	■■■□□ 2.22
SHF-208	ENST00000560734	BRMS1	Q9HCU9	246 aa		28.9	■■■□□ 2.22
SHF-208	ENST00000560734	SAP30BP	Q9UHR5	308 aa	Known RBP	28.89	■■■□□ 2.22
SHF-208	ENST00000560734	TTF2	Q9UNY4	1162 aa	Known RBP	28.89	■■■□□ 2.22
SHF-208	ENST00000560734	MYO3B	Q8WXR4	1341 aa		28.89	■■■□□ 2.22
SHF-208	ENST00000560734	MYH1	P12882	1939 aa		28.89	■■■□□ 2.22
SHF-208	ENST00000560734	PLIN4	Q96Q06	1357 aa		28.89	■■■□□ 2.22
SHF-208	ENST00000560734	KRT2	P35908	639 aa		28.89	■■■□□ 2.21
SHF-208	ENST00000560734	NDUFA8	P51970	172 aa		28.89	■■■□□ 2.21
SHF-208	ENST00000560734	SH3GLB2	Q9NR46	395 aa		28.89	■■■□□ 2.21
SHF-208	ENST00000560734	TOB1	P50616	345 aa	Predicted RBP	28.88	■■■□□ 2.21
SHF-208	ENST00000560734	PFKFB3	Q16875	520 aa	Predicted RBP	28.88	■■■□□ 2.21
SHF-208	ENST00000560734	STRIP1	Q5VSL9	837 aa		28.88	■■■□□ 2.21
SHF-208	ENST00000560734	HPSE	Q9Y251	543 aa		28.88	■■■□□ 2.21
SHF-208	ENST00000560734	SNED1	Q8TER0	1413 aa		28.87	■■■□□ 2.21
SHF-208	ENST00000560734	WDHD1	O75717	1129 aa	Predicted RBP	28.87	■■■□□ 2.21
SHF-208	ENST00000560734	EN1	Q05925	392 aa	Predicted RBP	28.87	■■■□□ 2.21
SHF-208	ENST00000560734	OLFM4	Q6UX06	510 aa		28.87	■■■□□ 2.21
SHF-208	ENST00000560734	C7orf43	Q8WVR3	580 aa		28.87	■■■□□ 2.21
SHF-208	ENST00000560734	TEKT1	Q969V4	418 aa		28.87	■■■□□ 2.21
SHF-208	ENST00000560734		A0A1B0GVL5	298 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	BMP15	O95972	392 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	SCG2	P13521	617 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	STX1A	Q16623	288 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	DOK7	Q18PE1	504 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	RESP18	Q5W5W9	173 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	ELOA2	Q8IYF1	753 aa	Predicted RBP	28.86	■■■□□ 2.21
SHF-208	ENST00000560734	ZNF579	Q8NAF0	562 aa	Known RBP	28.86	■■■□□ 2.21
SHF-208	ENST00000560734	SUPT20H	Q8NEM7	779 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	C10orf71	Q711Q0	1435 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	SMARCA1	P28370	1054 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	ANO6	Q4KMQ2	910 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	KRI1	Q8N9T8	703 aa	Known RBP	28.86	■■■□□ 2.21
SHF-208	ENST00000560734	CCDC39	Q9UFE4	941 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	SWAP70	Q9UH65	585 aa		28.86	■■■□□ 2.21
SHF-208	ENST00000560734	PFKFB1	P16118	471 aa		28.85	■■■□□ 2.21
SHF-208	ENST00000560734	GABPA	Q06546	454 aa		28.85	■■■□□ 2.21
SHF-208	ENST00000560734	VPS54	Q9P1Q0	977 aa		28.85	■■■□□ 2.21
SHF-208	ENST00000560734	NOL7	Q9UMY1	257 aa	Known RBP	28.85	■■■□□ 2.21
SHF-208	ENST00000560734	ZNF202	O95125	648 aa		28.84	■■■□□ 2.21
SHF-208	ENST00000560734	SLC44A5	Q8NCS7	719 aa		28.84	■■■□□ 2.21
SHF-208	ENST00000560734	TMEM47	Q9BQJ4	181 aa		28.84	■■■□□ 2.21
SHF-208	ENST00000560734	SDF4	Q9BRK5	362 aa		28.84	■■■□□ 2.21
SHF-208	ENST00000560734	SLX4	Q8IY92	1834 aa		28.84	■■■□□ 2.21
SHF-208	ENST00000560734	USP17L3	A6NCW0	530 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	USP17L4	A6NCW7	530 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	CALML3	P27482	149 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	USP17L1	Q7RTZ2	530 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	TNFRSF25	Q93038	417 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	FBXW7	Q969H0	707 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	SHISA4	Q96DD7	197 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	ZDHHC15	Q96MV8	337 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	ANO10	Q9NW15	660 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	PALM3	A6NDB9	673 aa	Predicted RBP	28.83	■■■□□ 2.21
SHF-208	ENST00000560734	NPM3	O75607	178 aa	Known RBP	28.83	■■■□□ 2.21
SHF-208	ENST00000560734	PTPRE	P23469	700 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	MARCKS	P29966	332 aa	Predicted RBP	28.83	■■■□□ 2.21
SHF-208	ENST00000560734	NR5A1	Q13285	461 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	SF3B2	Q13435	895 aa	Known RBP	28.83	■■■□□ 2.21
SHF-208	ENST00000560734	USP40	Q9NVE5	1235 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	MAD2L2	Q9UI95	211 aa		28.83	■■■□□ 2.21
SHF-208	ENST00000560734	TOP1	P11387	765 aa	Known RBP	28.82	■■■□□ 2.2
SHF-208	ENST00000560734	TRAPPC10	P48553	1259 aa		28.82	■■■□□ 2.2
SHF-208	ENST00000560734	SLC4A8	Q2Y0W8	1093 aa		28.82	■■■□□ 2.2
SHF-208	ENST00000560734	SHC4	Q6S5L8	630 aa		28.82	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms