RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 FEZ1Q99689 392 aa11.42□□□□□ -0.58
SMAD3-215ENST00000560424 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-215ENST00000560424 GINM1Q9NU53 330 aa11.42□□□□□ -0.58
SMAD3-215ENST00000560424 PDS5AQ29RF7 1337 aaKnown RBP11.41□□□□□ -0.58
SMAD3-215ENST00000560424 RLFQ13129 1914 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 TRIM43BA6NCK2 446 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 GDF11O95390 407 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 CLTBP09497 229 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 IL15P40933 162 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-215ENST00000560424 ADCYAP1R1P41586 468 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 RFX5P48382 616 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-215ENST00000560424 FPGSQ05932 587 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 RRP1BQ14684 758 aaKnown RBP11.41□□□□□ -0.58
SMAD3-215ENST00000560424 ZYXQ15942 572 aaKnown RBP11.41□□□□□ -0.58
SMAD3-215ENST00000560424 ANO1Q5XXA6 986 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 SH3RF1Q7Z6J0 888 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 FERMT2Q96AC1 680 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 TRIM43Q96BQ3 446 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-215ENST00000560424 RAI14Q9P0K7 980 aa11.41□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L15C9J2P7 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L13C9JLJ4 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L11C9JVI0 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L18D6R9N7 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L22D6RA61 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L17D6RBQ6 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L19D6RCP7 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L20D6RJB6 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 HOXC6P09630 235 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 CYBAP13498 195 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 IGFBP4P22692 258 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 TLE2Q04725 743 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 USP17L24Q0WX57 530 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
SMAD3-215ENST00000560424 SNX17Q15036 470 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 CCDC174Q6PII3 467 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 ATF7IPQ6VMQ6 1270 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 SLC5A4Q9NY91 659 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 ZBTB21Q9ULJ3 1066 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 DNAH12Q6ZR08 3092 aa11.4□□□□□ -0.58
SMAD3-215ENST00000560424 PTPRCP08575 1304 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 SEPT4O43236 478 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 BAG3O95817 575 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 HLA-DOAP06340 250 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 ADORA1P30542 326 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 RARSP54136 660 aaKnown RBP11.39□□□□□ -0.59
SMAD3-215ENST00000560424 USP14P54578 494 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 GRB14Q14449 540 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 CCDC85BQ15834 202 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-215ENST00000560424 AKNAD1Q5T1N1 836 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 GORABQ5T7V8 394 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 C1orf53Q5VUE5 145 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 NPLOC4Q8TAT6 608 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 USP44Q9H0E7 712 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 PRDM12Q9H4Q4 367 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
SMAD3-215ENST00000560424 ZBTB22O15209 634 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 PQBP1O60828 265 aaKnown RBP11.38□□□□□ -0.59
SMAD3-215ENST00000560424 UBTFL1P0CB47 393 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-215ENST00000560424 PLCG2P16885 1265 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 LRRC41Q15345 812 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 ALDH1L2Q3SY69 923 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 RNF180Q86T96 592 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 FOXP4Q8IVH2 680 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-215ENST00000560424 TRPV1Q8NER1 839 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 NSUN4Q96CB9 384 aaKnown RBP11.38□□□□□ -0.59
SMAD3-215ENST00000560424 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 LRP2BPQ9P2M1 347 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 AKAP2Q9Y2D5 859 aa11.38□□□□□ -0.59
SMAD3-215ENST00000560424 STRNO43815 780 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 CNMDO75829 334 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 ADORA2AP29274 412 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 TIMM10P62072 90 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 OLFML2BQ68BL8 750 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 MAPKAPK5Q8IW41 473 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 SH3RF3Q8TEJ3 882 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-215ENST00000560424 TGFBRAP1Q8WUH2 860 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 NEUROD6Q96NK8 337 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 XPNPEP3Q9NQH7 507 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 AATFQ9NY61 560 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMAD3-215ENST00000560424 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
SMAD3-215ENST00000560424 A0A1B0GUL7 405 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 DCDC2CA8MYV0 355 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 APBB1O00213 710 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 GH2P01242 217 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 RARBP10826 455 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 ITGB8P26012 769 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 EPHB4P54760 987 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 RAB3GAP1Q15042 981 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 AAK1Q2M2I8 961 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 FAM47AQ5JRC9 791 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 CATSPERGQ6ZRH7 1159 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 TBC1D9Q6ZT07 1266 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 SPATA5Q8NB90 893 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 MSRAQ9UJ68 235 aa11.36□□□□□ -0.59
SMAD3-215ENST00000560424 PA2G4Q9UQ80 394 aaKnown RBP11.36□□□□□ -0.59
SMAD3-215ENST00000560424 ARIH1Q9Y4X5 557 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-215ENST00000560424 KIAA0355O15063 1070 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms