RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 SAGE1Q9NXZ1 904 aa8□□□□□ -1.13
IRF9-208ENST00000560311 DDX19BQ9UMR2 479 aa8□□□□□ -1.13
IRF9-208ENST00000560311 COG6Q9Y2V7 657 aa8□□□□□ -1.13
IRF9-208ENST00000560311 FPGT-TNNI3KV9GXZ4 949 aa8□□□□□ -1.13
IRF9-208ENST00000560311 GAKO14976 1311 aa8□□□□□ -1.13
IRF9-208ENST00000560311 PPP1R12BO60237 982 aaPredicted RBP7.99□□□□□ -1.13
IRF9-208ENST00000560311 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 MCAMP43121 646 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 IREB2P48200 963 aaKnown RBP7.99□□□□□ -1.13
IRF9-208ENST00000560311 TTC39AQ5SRH9 613 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 LDLRAD1Q5T700 205 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 C20orf194Q5TEA3 1177 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 SPATA5Q8NB90 893 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 BAP1Q92560 729 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 CLMNQ96JQ2 1002 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 DBNDD2Q9BQY9 259 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 GPR108Q9NPR9 543 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 TLR7Q9NYK1 1049 aaKnown RBP7.99□□□□□ -1.13
IRF9-208ENST00000560311 HMG20BQ9P0W2 317 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 ABCF2Q9UG63 623 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 NOP58Q9Y2X3 529 aaKnown RBP7.99□□□□□ -1.13
IRF9-208ENST00000560311 LAMB1P07942 1786 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 MROH7-TTC4A0A0A0MT08 1334 aa7.99□□□□□ -1.13
IRF9-208ENST00000560311 MAN1A2O60476 641 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 UQCRFS1P1P0C7P4 283 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 SREBF2Q12772 1141 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 NFIAQ12857 509 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 FKBP1CQ5VVH2 108 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 CDC42EP5Q6NZY7 148 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 FAM83AQ86UY5 434 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 ERC1Q8IUD2 1116 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.98□□□□□ -1.13
IRF9-208ENST00000560311 WNK4Q96J92 1243 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 YTHDC1Q96MU7 727 aaKnown RBP7.98□□□□□ -1.13
IRF9-208ENST00000560311 CSRNP1Q96S65 589 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 MRIQ9BWK5 157 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 ZBTB40Q9NUA8 1239 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 DBNLQ9UJU6 430 aaKnown RBP7.98□□□□□ -1.13
IRF9-208ENST00000560311 EXOC6BQ9Y2D4 811 aa7.98□□□□□ -1.13
IRF9-208ENST00000560311 ATRNL1Q5VV63 1379 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 DOCK2Q92608 1830 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 UNCXA6NJT0 531 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 ADH1CP00326 375 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 CCNYL3P0C7X3 344 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 ZBTB48P10074 688 aaPredicted RBP7.97□□□□□ -1.13
IRF9-208ENST00000560311 BTDP43251 543 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 KRT76Q01546 638 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 MECOMQ03112 1051 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 VGLL4Q14135 290 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 C6orf118Q5T5N4 469 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 SPTY2D1Q68D10 685 aaPredicted RBP7.97□□□□□ -1.13
IRF9-208ENST00000560311 ERICH6Q7L0X2 663 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 RETREG3Q86VR2 466 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 ANKRD13AQ8IZ07 590 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.97□□□□□ -1.134e-9■□□□□ 9.6
IRF9-208ENST00000560311 ZNF384Q8TF68 577 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 UNC93B1Q9H1C4 597 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 ELP3Q9H9T3 547 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 RNF186Q9NXI6 227 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 RAI14Q9P0K7 980 aa7.97□□□□□ -1.13
IRF9-208ENST00000560311 COL2A1P02458 1487 aaPredicted RBP7.96□□□□□ -1.13
IRF9-208ENST00000560311 HMMRO75330 724 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 USP2O75604 605 aaPredicted RBP7.96□□□□□ -1.14
IRF9-208ENST00000560311 TRPA1O75762 1119 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 GJA5P36382 358 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 RGS3P49796 1198 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 GSTO1P78417 241 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 MDM2Q00987 491 aaPredicted RBP7.96□□□□□ -1.14
IRF9-208ENST00000560311 TCP10Q12799 353 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 CCDC158Q5M9N0 1113 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 TBC1D9Q6ZT07 1266 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 AACSQ86V21 672 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 SIRT2Q8IXJ6 389 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 FAM151AQ8WW52 585 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 NSUN4Q96CB9 384 aaKnown RBP7.96□□□□□ -1.14
IRF9-208ENST00000560311 EAF2Q96CJ1 260 aaPredicted RBP7.96□□□□□ -1.14
IRF9-208ENST00000560311 OPTNQ96CV9 577 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 HOOK2Q96ED9 719 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 WRNIP1Q96S55 665 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 KLF16Q9BXK1 252 aaPredicted RBP7.96□□□□□ -1.14
IRF9-208ENST00000560311 CCDC8Q9H0W5 538 aaPredicted RBP7.96□□□□□ -1.14
IRF9-208ENST00000560311 CHMP4BQ9H444 224 aaKnown RBP7.96□□□□□ -1.14
IRF9-208ENST00000560311 SNRKQ9NRH2 765 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 USP40Q9NVE5 1235 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 CSADQ9Y600 493 aa7.96□□□□□ -1.14
IRF9-208ENST00000560311 POLR2AP24928 1970 aaKnown RBP7.95□□□□□ -1.14
IRF9-208ENST00000560311 MANSC4A6NHS7 340 aaPredicted RBP7.95□□□□□ -1.14
IRF9-208ENST00000560311 APBB1O00213 710 aa7.95□□□□□ -1.14
IRF9-208ENST00000560311 WDHD1O75717 1129 aaPredicted RBP7.95□□□□□ -1.14
IRF9-208ENST00000560311 RRP1P56182 461 aaKnown RBP7.95□□□□□ -1.14
IRF9-208ENST00000560311 PICALMQ13492 652 aa7.95□□□□□ -1.14
IRF9-208ENST00000560311 HSP90AB4PQ58FF6 505 aa7.95□□□□□ -1.14
IRF9-208ENST00000560311 DCAF15Q66K64 600 aa7.95□□□□□ -1.14
IRF9-208ENST00000560311 GPAT2Q6NUI2 795 aa7.95□□□□□ -1.14
IRF9-208ENST00000560311 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
IRF9-208ENST00000560311 GPIHBP1Q8IV16 184 aa7.95□□□□□ -1.14
IRF9-208ENST00000560311 RPAP2Q8IXW5 612 aaPredicted RBP7.95□□□□□ -1.14
IRF9-208ENST00000560311 GPR161Q8N6U8 529 aaKnown RBP7.95□□□□□ -1.14
IRF9-208ENST00000560311 RHPN1Q8TCX5 695 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms