RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 FEZ1Q99689 392 aa13.98□□□□□ -0.17
RABGGTA-216ENST00000560243 CABP5Q9NP86 173 aa13.98□□□□□ -0.17
RABGGTA-216ENST00000560243 SWAP70Q9UH65 585 aa13.98□□□□□ -0.17
RABGGTA-216ENST00000560243 PNMA3Q9UL41 463 aa13.98□□□□□ -0.17
RABGGTA-216ENST00000560243 A0A1W2PRG0 241 aa13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 RGS19P49795 217 aa13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 USP17L2Q6R6M4 530 aa13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 POTEEQ6S8J3 1075 aa13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 C16orf86Q6ZW13 317 aa13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 SIAH1Q8IUQ4 282 aa13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 KIAA1683Q9H0B3 1180 aa13.97□□□□□ -0.17
RABGGTA-216ENST00000560243 MINDY4BA8MYZ0 360 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 FOXP2O15409 715 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 IRX3P78415 501 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 PABPC4Q13310 644 aaKnown RBP eCLIP13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 LRRFIP1Q32MZ4 808 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 SBK1Q52WX2 424 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 AMOTL1Q8IY63 956 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 SH3TC2Q8TF17 1288 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 ARMC5Q96C12 935 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 EVI5LQ96CN4 794 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 C12orf42Q96LP6 360 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 TXNRD2Q9NNW7 524 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 ARPP21Q9UBL0 812 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 SRRDQ9UH36 339 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 GABRQQ9UN88 632 aa13.96□□□□□ -0.17
RABGGTA-216ENST00000560243 PATL2C9JE40 543 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 GNRH1P01148 92 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 APPP05067 770 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 VCAM1P19320 739 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 GCLCP48506 637 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 TDO2P48775 406 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 FCGRTP55899 365 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 HERVK_113P62684 666 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 PRKCZQ05513 592 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 FAM110CQ1W6H9 321 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 SLC9C1Q4G0N8 1177 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 KIAA1755Q5JYT7 1200 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 TMEM179Q6ZVK1 233 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 IFNL3Q8IZI9 196 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 FAM227BQ96M60 508 aa13.95□□□□□ -0.18
RABGGTA-216ENST00000560243 MYPNQ86TC9 1320 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 GNAT2P19087 354 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 RASA1P20936 1047 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 VPS53Q5VIR6 699 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 ZNF333Q96JL9 665 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 CCDC17Q96LX7 622 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 RBPJLQ9UBG7 517 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 MORF4L1Q9UBU8 362 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 TAOK2Q9UL54 1235 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 MKI67P46013 3256 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 ROBO3Q96MS0 1386 aa13.94□□□□□ -0.18
RABGGTA-216ENST00000560243 A0A0D9SFI3 127 aa13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 TRIM6-TRIM34B2RNG4 842 aa13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 PDE4AP27815 886 aa13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 USP14P54578 494 aa13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 PRMT2P55345 433 aa13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 ICA1Q05084 483 aa13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 PDE4DIPQ5VU43 2346 aa13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 GREB1LQ9C091 1923 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L15C9J2P7 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L13C9JLJ4 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L11C9JVI0 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L18D6R9N7 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L22D6RA61 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L17D6RBQ6 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L19D6RCP7 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L20D6RJB6 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 PRDM1O75626 825 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 EEF2P13639 858 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 HOXD10P28358 340 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 FLT3LGP49771 235 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 MLLT1Q03111 559 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 USP17L24Q0WX57 530 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 NMIQ13287 307 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 Q3C1V9 767 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 CATSPERGQ6ZRH7 1159 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 SPICE1Q8N0Z3 855 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 RAET1EQ8TD07 263 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 PAGR1Q9BTK6 254 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 OSBPL3Q9H4L5 887 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 TMX2Q9Y320 296 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 RLFQ13129 1914 aa13.92□□□□□ -0.18
RABGGTA-216ENST00000560243 CNMDO75829 334 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 ELNP15502 786 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 GRK4P32298 578 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 ZNF589Q86UQ0 364 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 GPRC5AQ8NFJ5 357 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 NACAP1Q9BZK3 213 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms