RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TRIM74Q86UV6 250 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 TRIM73Q86UV7 250 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 OR8K1Q8NGG5 319 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 BABAM1Q9NWV8 329 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 ZMYND10O75800 440 aa21.55■■□□□ 1.04
SEMA4B-215ENST00000560089 HOOK2Q96ED9 719 aa21.55■■□□□ 1.04
SEMA4B-215ENST00000560089 MYO1BO43795 1136 aa21.55■■□□□ 1.04
SEMA4B-215ENST00000560089 RAD9BQ6WBX8 426 aa21.55■■□□□ 1.04
SEMA4B-215ENST00000560089 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
SEMA4B-215ENST00000560089 DRP2Q13474 957 aa21.54■■□□□ 1.04
SEMA4B-215ENST00000560089 FILIP1LQ4L180 1135 aa21.54■■□□□ 1.04
SEMA4B-215ENST00000560089 THEMIS2Q5TEJ8 643 aa21.54■■□□□ 1.04
SEMA4B-215ENST00000560089 MAP4K1Q92918 833 aa21.54■■□□□ 1.04
SEMA4B-215ENST00000560089 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
SEMA4B-215ENST00000560089 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
SEMA4B-215ENST00000560089 KAT6BQ8WYB5 2073 aa21.54■■□□□ 1.04
SEMA4B-215ENST00000560089 CCDC181Q5TID7 509 aa21.54■■□□□ 1.04
SEMA4B-215ENST00000560089 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 PES1O00541 588 aaKnown RBP21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 GLRX3O76003 335 aaKnown RBP21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 ACTR5Q9H9F9 607 aaPredicted RBP21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 SLC39A2Q9NP94 309 aa21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 ACCSLQ4AC99 568 aa21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 ZNF473Q8WTR7 871 aaKnown RBP21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 C8orf37Q96NL8 207 aa21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 TAF6LQ9Y6J9 622 aa21.53■■□□□ 1.04
SEMA4B-215ENST00000560089 OPA1O60313 960 aa21.52■■□□□ 1.04
SEMA4B-215ENST00000560089 MYSM1Q5VVJ2 828 aa21.52■■□□□ 1.04
SEMA4B-215ENST00000560089 OLFM4Q6UX06 510 aa21.52■■□□□ 1.04
SEMA4B-215ENST00000560089 HAUS2Q9NVX0 235 aa21.52■■□□□ 1.04
SEMA4B-215ENST00000560089 STK38Q15208 465 aa21.52■■□□□ 1.04
SEMA4B-215ENST00000560089 NFXL1Q6ZNB6 911 aa21.52■■□□□ 1.04
SEMA4B-215ENST00000560089 CCDC121Q6ZUS5 278 aa21.52■■□□□ 1.04
SEMA4B-215ENST00000560089 SCN11AQ9UI33 1791 aa21.52■■□□□ 1.04
SEMA4B-215ENST00000560089 A0A0G2JS52 829 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 AKR1B15C9JRZ8 316 aaPredicted RBP21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 CERKQ8TCT0 537 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 TCP11Q8WWU5 503 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 TMX4Q9H1E5 349 aaPredicted RBP21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 EPN3Q9H201 632 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 TARSL2A2RTX5 802 aaKnown RBP21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 ATP1A2P50993 1020 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 RASSF8Q8NHQ8 419 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 RIPOR2Q9Y4F9 1068 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 PKD1L3Q7Z443 1732 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 PTCD1O75127 700 aaKnown RBP21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 GUCY1B3Q02153 619 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 IFFO1Q0D2I5 559 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 TTC5Q8N0Z6 440 aa21.51■■□□□ 1.03
SEMA4B-215ENST00000560089 PYGLP06737 847 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 AIMP1Q12904 312 aaKnown RBP21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 BZW1Q7L1Q6 419 aaKnown RBP21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 PANX2Q96RD6 677 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 MYL6BP14649 208 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 LSP1P33241 339 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 AMPD2Q01433 879 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 NSMCE1Q8WV22 266 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 YIPF3Q9GZM5 350 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 RTEL1Q9NZ71 1219 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 TRPC6Q9Y210 931 aa21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 COL22A1Q8NFW1 1626 aaPredicted RBP21.5■■□□□ 1.03
SEMA4B-215ENST00000560089 ATP5JP18859 108 aa21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 CCNI2Q6ZMN8 369 aaPredicted RBP21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 SSH3Q8TE77 659 aa21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 TBC1D31Q96DN5 1066 aa21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 COL14A1Q05707 1796 aaKnown RBP21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 BUB1BO60566 1050 aaPredicted RBP21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 MIS18BP1Q6P0N0 1132 aa21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 RASGRP2Q7LDG7 609 aa21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 SPAG5Q96R06 1193 aa21.49■■□□□ 1.03
SEMA4B-215ENST00000560089 ILDR1Q86SU0 546 aaPredicted RBP21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 PIK3R5Q8WYR1 880 aa21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 FAM227BQ96M60 508 aa21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 RUFY1Q96T51 708 aa21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 NAA15Q9BXJ9 866 aaKnown RBP21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 PARP4Q9UKK3 1724 aaKnown RBP21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 TTF2Q9UNY4 1162 aaKnown RBP21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 SIPA1L3O60292 1781 aaPredicted RBP21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 RTN3O95197 1032 aaPredicted RBP21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 ARL8AQ96BM9 186 aa21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 CHCHD3Q9NX63 227 aaKnown RBP21.48■■□□□ 1.03
SEMA4B-215ENST00000560089 HDLBPQ00341 1268 aaKnown RBP21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 MYO1EQ12965 1108 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 MTA1Q13330 715 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 TTMPQ5BVD1 217 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 SND1Q7KZF4 910 aaKnown RBP eCLIP21.47■■□□□ 1.036e-7■■□□□ 14.4
SEMA4B-215ENST00000560089 LINC00301Q8NCQ3 95 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 NUP133Q8WUM0 1156 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 HOOK1Q9UJC3 728 aaKnown RBP21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 GGA2Q9UJY4 613 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 C1QTNF12Q5T7M4 302 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 BRAPQ7Z569 592 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 KCNG4Q8TDN1 519 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 NGLY1Q96IV0 654 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 TUBE1Q9UJT0 475 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 OPLAHO14841 1288 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 ABL1P00519 1130 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 UBTFL1P0CB47 393 aaPredicted RBP21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 Q6ZUG5 572 aa21.47■■□□□ 1.03
SEMA4B-215ENST00000560089 CCDC47Q96A33 483 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms