RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 INHBEP58166 350 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 EXOSC10Q01780 885 aaKnown RBP10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ICA1Q05084 483 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 DEFB115Q30KQ5 88 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 BLOC1S2Q6QNY1 142 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 STOX1Q6ZVD7 989 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ZNF280CQ8ND82 737 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 TBC1D32Q96NH3 1257 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-215ENST00000559774 UBAC1Q9BSL1 405 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.23□□□□□ -0.77
LRRC28-215ENST00000559774 KIAA1683Q9H0B3 1180 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ALDH8A1Q9H2A2 487 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ARHGEF10LQ9HCE6 1279 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ZSWIM6Q9HCJ5 1215 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ABT1Q9ULW3 272 aaKnown RBP10.23□□□□□ -0.77
LRRC28-215ENST00000559774 KCNH4Q9UQ05 1017 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 AFG3L2Q9Y4W6 797 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 ZHX2Q9Y6X8 837 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 LAMB1P07942 1786 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 SIPA1L1O43166 1804 aa10.23□□□□□ -0.77
LRRC28-215ENST00000559774 BAZ2AQ9UIF9 1905 aaKnown RBP10.23□□□□□ -0.77
LRRC28-215ENST00000559774 LAMA4Q16363 1823 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 SLURP2P0DP57 97 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 HSPA6P17066 643 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 LIFRP42702 1097 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 ZNF157P51786 506 aaPredicted RBP10.22□□□□□ -0.77
LRRC28-215ENST00000559774 GTF2A2P52657 109 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 BACE1P56817 501 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 JAG1P78504 1218 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 SEPT2Q15019 361 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 RAB3GAP1Q15042 981 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 FAM47AQ5JRC9 791 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 RRP12Q5JTH9 1297 aaKnown RBP10.22□□□□□ -0.77
LRRC28-215ENST00000559774 SPRYD7Q5W111 196 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 MOB2Q70IA6 237 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 RUFY3Q7L099 469 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 STK11IPQ8N1F8 1099 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 LPAR1Q92633 364 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 CEP95Q96GE4 821 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 CLMNQ96JQ2 1002 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 JAKMIP1Q96N16 626 aaKnown RBP10.22□□□□□ -0.77
LRRC28-215ENST00000559774 INCENPQ9NQS7 918 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 FZD1Q9UP38 647 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 TMX2Q9Y320 296 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 CYP46A1Q9Y6A2 500 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 TAF6LQ9Y6J9 622 aa10.22□□□□□ -0.77
LRRC28-215ENST00000559774 TRPM7Q96QT4 1865 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 PRC1O43663 620 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 SLC10A3P09131 477 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 TOP1P11387 765 aaKnown RBP10.21□□□□□ -0.77
LRRC28-215ENST00000559774 CETPP11597 493 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 RPS6KB1P23443 525 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 RCAN1P53805 252 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 NOGQ13253 232 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 SNAPC2Q13487 334 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 ADCK5Q3MIX3 580 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 FASTKD5Q7L8L6 764 aaKnown RBP10.21□□□□□ -0.77
LRRC28-215ENST00000559774 SIAH1Q8IUQ4 282 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 GMCL1P1Q8NEA9 526 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 IGDCC4Q8TDY8 1250 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 OPTNQ96CV9 577 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 WNK4Q96J92 1243 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 C12orf42Q96LP6 360 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 AGXT2Q9BYV1 514 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 ELP3Q9H9T3 547 aa10.21□□□□□ -0.77
LRRC28-215ENST00000559774 A0A0G2JLL6 359 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 TESPA1A2RU30 521 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 MANSC4A6NHS7 340 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 IFIT3O14879 490 aaKnown RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 IRF6O14896 467 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 TNKSO95271 1327 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 EEF2P13639 858 aaKnown RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 CASTP20810 708 aaKnown RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 MAP2K2P36507 400 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 ANTXR2P58335 489 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 SPP2Q13103 211 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 RABEP1Q15276 862 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 ANKRD1Q15327 319 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 SEC23AQ15436 765 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 RCSD1Q6JBY9 416 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 CYB5R4Q7L1T6 521 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 PRRT2Q7Z6L0 340 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 SGMS1Q86VZ5 419 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 RASAL3Q86YV0 1011 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 ENAHQ8N8S7 591 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 PROCA1Q8NCQ7 364 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 OTUD5Q96G74 571 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 MAP3K14Q99558 947 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 GOPCQ9HD26 462 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 ZCCHC17Q9NP64 241 aaKnown RBP10.2□□□□□ -0.78
LRRC28-215ENST00000559774 CLIP2Q9UDT6 1046 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 STX8Q9UNK0 236 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 SLC45A1Q9Y2W3 748 aa10.2□□□□□ -0.78
LRRC28-215ENST00000559774 FAM155AB1AL88 458 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms