RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 REC114Q7Z4M0 266 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 SLFN12Q8IYM2 578 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 TMEM40Q8WWA1 233 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 FAM168AQ92567 244 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 UBE2FQ969M7 185 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 CARS2Q9HA77 564 aaKnown RBP6.51□□□□□ -1.37
SPG11-218ENST00000559754 PRDM7Q9NQW5 492 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 KCNH3Q9ULD8 1083 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 SUPT16HQ9Y5B9 1047 aaKnown RBP6.51□□□□□ -1.37
SPG11-218ENST00000559754 HTR3BO95264 441 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 AFMP43652 599 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 TNK2Q07912 1038 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 OGFOD2Q6N063 350 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 TMPRSS7Q7RTY8 843 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 TRIT1Q9H3H1 467 aaKnown RBP6.5□□□□□ -1.37
SPG11-218ENST00000559754 KCNQ5Q9NR82 932 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 ZSWIM5Q9P217 1185 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 REV1Q9UBZ9 1251 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 GGT7Q9UJ14 662 aa6.5□□□□□ -1.37
SPG11-218ENST00000559754 UPK3BL1B0FP48 263 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 UPK3BL2E5RIL1 263 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 GARTP22102 1010 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 EIF4A3P38919 411 aaKnown RBP6.49□□□□□ -1.37
SPG11-218ENST00000559754 TNNI2P48788 182 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 CHMP4BP1P59074 171 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 POU5F2Q8N7G0 328 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 PPP1R13LQ8WUF5 828 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 LRRC3Q9BY71 257 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 KLHL3Q9UH77 587 aa6.49□□□□□ -1.37
SPG11-218ENST00000559754 POLR3KQ9Y2Y1 108 aaPredicted RBP6.49□□□□□ -1.37
SPG11-218ENST00000559754 GRIN3BO60391 1043 aa6.48□□□□□ -1.37
SPG11-218ENST00000559754 FBXL19Q6PCT2 694 aa6.48□□□□□ -1.37
SPG11-218ENST00000559754 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
SPG11-218ENST00000559754 CCDC74BQ96LY2 380 aa6.48□□□□□ -1.37
SPG11-218ENST00000559754 COPRSQ9NQ92 184 aa6.48□□□□□ -1.37
SPG11-218ENST00000559754 GPATCH2Q9NW75 528 aa6.48□□□□□ -1.37
SPG11-218ENST00000559754 CTNND2Q9UQB3 1225 aa6.48□□□□□ -1.37
SPG11-218ENST00000559754 CARMIL2Q6F5E8 1435 aa6.48□□□□□ -1.37
SPG11-218ENST00000559754 KCNMB1Q16558 191 aa6.47□□□□□ -1.37
SPG11-218ENST00000559754 ZSWIM9Q86XI8 627 aa6.47□□□□□ -1.37
SPG11-218ENST00000559754 PHACTR4Q8IZ21 702 aa6.47□□□□□ -1.37
SPG11-218ENST00000559754 ZNF296Q8WUU4 475 aaPredicted RBP6.47□□□□□ -1.37
SPG11-218ENST00000559754 Q96M66 194 aa6.47□□□□□ -1.37
SPG11-218ENST00000559754 ALPK1Q96QP1 1244 aa6.47□□□□□ -1.37
SPG11-218ENST00000559754 GPR62Q9BZJ7 368 aa6.47□□□□□ -1.37
SPG11-218ENST00000559754 FAM53CQ9NYF3 392 aa6.47□□□□□ -1.37
SPG11-218ENST00000559754 CHURC1-FNTBB4DL54 471 aa6.46□□□□□ -1.38
SPG11-218ENST00000559754 TLR3O15455 904 aaKnown RBP6.46□□□□□ -1.38
SPG11-218ENST00000559754 GREM1O60565 184 aa6.46□□□□□ -1.38
SPG11-218ENST00000559754 ZNF16P17020 682 aaPredicted RBP6.46□□□□□ -1.38
SPG11-218ENST00000559754 GBP1P32455 592 aa6.46□□□□□ -1.38
SPG11-218ENST00000559754 GDNFP39905 211 aa6.46□□□□□ -1.38
SPG11-218ENST00000559754 DTWD2Q8NBA8 298 aa6.46□□□□□ -1.38
SPG11-218ENST00000559754 TMEM87AQ8NBN3 555 aa6.46□□□□□ -1.38
SPG11-218ENST00000559754 FBXO27Q8NI29 283 aa6.46□□□□□ -1.38
SPG11-218ENST00000559754 ASPNQ9BXN1 380 aa6.46□□□□□ -1.38
SPG11-218ENST00000559754 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
SPG11-218ENST00000559754 ATE1O95260 518 aa6.45□□□□□ -1.38
SPG11-218ENST00000559754 TPP2P29144 1249 aaPredicted RBP6.45□□□□□ -1.38
SPG11-218ENST00000559754 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
SPG11-218ENST00000559754 CREG2Q8IUH2 290 aa6.45□□□□□ -1.38
SPG11-218ENST00000559754 KREMEN1Q96MU8 473 aa6.45□□□□□ -1.38
SPG11-218ENST00000559754 DUSP15Q9H1R2 295 aaPredicted RBP6.45□□□□□ -1.38
SPG11-218ENST00000559754 BRMS1Q9HCU9 246 aa6.45□□□□□ -1.38
SPG11-218ENST00000559754 PCDHB14Q9Y5E9 798 aa6.45□□□□□ -1.38
SPG11-218ENST00000559754 FARP2O94887 1054 aaPredicted RBP6.44□□□□□ -1.38
SPG11-218ENST00000559754 ESR1P03372 595 aa6.44□□□□□ -1.38
SPG11-218ENST00000559754 SRFP11831 508 aa6.44□□□□□ -1.38
SPG11-218ENST00000559754 MFAP1P55081 439 aaKnown RBP6.44□□□□□ -1.38
SPG11-218ENST00000559754 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
SPG11-218ENST00000559754 TSPYL5Q86VY4 417 aaPredicted RBP6.44□□□□□ -1.38
SPG11-218ENST00000559754 BAHD1Q8TBE0 780 aaPredicted RBP6.44□□□□□ -1.38
SPG11-218ENST00000559754 SYTL4Q96C24 671 aaPredicted RBP6.44□□□□□ -1.38
SPG11-218ENST00000559754 KIRREL1Q96J84 757 aa6.44□□□□□ -1.38
SPG11-218ENST00000559754 SLAMF8Q9P0V8 285 aa6.44□□□□□ -1.38
SPG11-218ENST00000559754 GMIPQ9P107 970 aa6.44□□□□□ -1.38
SPG11-218ENST00000559754 DUSP13Q9UII6 198 aa6.44□□□□□ -1.38
SPG11-218ENST00000559754 SLC22A31A6NKX4 558 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 RGS13O14921 159 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 GLI1P08151 1106 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 RAC2P15153 192 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 RAG1P15918 1043 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 ZNF165P49910 485 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 RNF4P78317 190 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 TMEM67Q5HYA8 995 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 TTC6Q86TZ1 520 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 REXO1Q8N1G1 1221 aaKnown RBP6.43□□□□□ -1.38
SPG11-218ENST00000559754 KIF2CQ99661 725 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 NT5C1AQ9BXI3 368 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 ASCC2Q9H1I8 757 aaPredicted RBP6.43□□□□□ -1.38
SPG11-218ENST00000559754 EHMT1Q9H9B1 1298 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 ADAMTS1Q9UHI8 967 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 TMEM59LQ9UK28 342 aa6.43□□□□□ -1.38
SPG11-218ENST00000559754 LTKP29376 864 aa6.42□□□□□ -1.38
SPG11-218ENST00000559754 ZNF76P36508 570 aa6.42□□□□□ -1.38
SPG11-218ENST00000559754 RAD51AP2Q09MP3 1159 aa6.42□□□□□ -1.38
SPG11-218ENST00000559754 APOBRQ0VD83 1088 aa6.42□□□□□ -1.38
SPG11-218ENST00000559754 GAB4Q2WGN9 574 aa6.42□□□□□ -1.38
SPG11-218ENST00000559754 LRRFIP1Q32MZ4 808 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms