RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TMEM179Q6ZVK1 233 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 SMC5Q8IY18 1101 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 RAET1EQ8TD07 263 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 ACER1Q8TDN7 264 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 SEC62Q99442 399 aaKnown RBP9.81□□□□□ -0.84
SNX1-207ENST00000559401 NACAP1Q9BZK3 213 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
SNX1-207ENST00000559401 GSG1L2A8MUP6 293 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 SMIM22K7EJ46 135 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 AKR1B1P15121 316 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 CTGFP29279 349 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 GCLCP48506 637 aaPredicted RBP9.8□□□□□ -0.84
SNX1-207ENST00000559401 CDK8P49336 464 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 PRMT2P55345 433 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 ATP2B2Q01814 1243 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 FAM110CQ1W6H9 321 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 C16orf86Q6ZW13 317 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 NBPF11Q86T75 865 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 CHD1LQ86WJ1 897 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 CLEC10AQ8IUN9 316 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 CCAR1Q8IX12 1150 aaKnown RBP9.8□□□□□ -0.84
SNX1-207ENST00000559401 SH3TC2Q8TF17 1288 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 RILPL2Q969X0 211 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 EVI5LQ96CN4 794 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 PAGR1Q9BTK6 254 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 MKNK2Q9HBH9 465 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 ARHGEF10LQ9HCE6 1279 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 CWC22Q9HCG8 908 aaKnown RBP9.8□□□□□ -0.84
SNX1-207ENST00000559401 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 BIN2Q9UBW5 565 aaPredicted RBP9.8□□□□□ -0.84
SNX1-207ENST00000559401 STAP2Q9UGK3 403 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 SRRDQ9UH36 339 aa9.8□□□□□ -0.84
SNX1-207ENST00000559401 RBBP6Q7Z6E9 1792 aaKnown RBP9.79□□□□□ -0.84
SNX1-207ENST00000559401 RAD21O60216 631 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 GUCY1A2P33402 732 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 HERVK_113P62684 666 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 ICA1Q05084 483 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 PRKCZQ05513 592 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 ZMYM1Q5SVZ6 1142 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 GIMAP6Q6P9H5 292 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 CCDC129Q6ZRS4 1044 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 COA7Q96BR5 231 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 CCDC17Q96LX7 622 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 P2RX7Q99572 595 aaKnown RBP9.79□□□□□ -0.84
SNX1-207ENST00000559401 TMEM106CQ9BVX2 250 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 TANGO6Q9C0B7 1094 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 KIAA1683Q9H0B3 1180 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 NAPBQ9H115 298 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 SH2D4AQ9H788 454 aa9.79□□□□□ -0.84
SNX1-207ENST00000559401 EPB41L4AQ9HCS5 686 aaPredicted RBP9.79□□□□□ -0.84
SNX1-207ENST00000559401 USP17L15C9J2P7 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 PATL2C9JE40 543 aaKnown RBP9.78□□□□□ -0.84
SNX1-207ENST00000559401 USP17L13C9JLJ4 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 USP17L11C9JVI0 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 USP17L18D6R9N7 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 USP17L22D6RA61 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 USP17L17D6RBQ6 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 USP17L19D6RCP7 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 USP17L20D6RJB6 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 PEX10O60683 326 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 VCAM1P19320 739 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 HOXA7P31268 230 aaPredicted RBP9.78□□□□□ -0.84
SNX1-207ENST00000559401 NUCB1Q02818 461 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 USP17L24Q0WX57 530 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 SBK1Q52WX2 424 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 SAMD1Q6SPF0 538 aaPredicted RBP9.78□□□□□ -0.84
SNX1-207ENST00000559401 IFNL3Q8IZI9 196 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 ARMC5Q96C12 935 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 C12orf42Q96LP6 360 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 RPAP3Q9H6T3 665 aaPredicted RBP9.78□□□□□ -0.84
SNX1-207ENST00000559401 GABRQQ9UN88 632 aa9.78□□□□□ -0.84
SNX1-207ENST00000559401 ROBO3Q96MS0 1386 aa9.77□□□□□ -0.84
SNX1-207ENST00000559401 A0A1W2PRG0 241 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 PRDM1O75626 825 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 SLC3A2P08195 630 aaKnown RBP9.77□□□□□ -0.85
SNX1-207ENST00000559401 GRK4P32298 578 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 FLT3LGP49771 235 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 RGS19P49795 217 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 WDR78Q5VTH9 848 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 SPICE1Q8N0Z3 855 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 GPRC5AQ8NFJ5 357 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 GTF3C2Q8WUA4 911 aaPredicted RBP9.77□□□□□ -0.85
SNX1-207ENST00000559401 ZNF333Q96JL9 665 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 ZNF287Q9HBT7 754 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 MYH4Q9Y623 1939 aa9.77□□□□□ -0.85
SNX1-207ENST00000559401 GREB1LQ9C091 1923 aaPredicted RBP9.76□□□□□ -0.85
SNX1-207ENST00000559401 POTEFA5A3E0 1075 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 ADCY3O60266 1144 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 EEF2P13639 858 aaKnown RBP9.76□□□□□ -0.85
SNX1-207ENST00000559401 ELNP15502 786 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 RASA1P20936 1047 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 ERVK-9P63128 1117 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 ERVK-24P63145 666 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 UBXN2AP68543 259 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 PDE4BQ07343 736 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 NMIQ13287 307 aaPredicted RBP9.76□□□□□ -0.85
SNX1-207ENST00000559401 CATSPERGQ6ZRH7 1159 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 PLEKHM2Q8IWE5 1019 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 ZNF444Q8N0Y2 327 aaPredicted RBP9.76□□□□□ -0.85
SNX1-207ENST00000559401 SLAIN1Q8ND83 568 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms