RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 EEPD1Q7L9B9 569 aa16.22■□□□□ 0.19
CASC4-208ENST00000559151 PPFIBP1Q86W92 1011 aa16.22■□□□□ 0.19
CASC4-208ENST00000559151 ACSS3Q9H6R3 686 aa16.22■□□□□ 0.19
CASC4-208ENST00000559151 FAM86C1Q9NVL1 165 aa16.22■□□□□ 0.19
CASC4-208ENST00000559151 PCOLCE2Q9UKZ9 415 aa16.22■□□□□ 0.19
CASC4-208ENST00000559151 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.21■□□□□ 0.19
CASC4-208ENST00000559151 ANKRD62A6NC57 917 aa16.21■□□□□ 0.19
CASC4-208ENST00000559151 GAS2O43903 313 aaKnown RBP16.21■□□□□ 0.19
CASC4-208ENST00000559151 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
CASC4-208ENST00000559151 HSD3B2P26439 372 aa16.21■□□□□ 0.19
CASC4-208ENST00000559151 COL8A1P27658 744 aa16.21■□□□□ 0.19
CASC4-208ENST00000559151 ST13P5Q8NFI4 369 aaPredicted RBP16.21■□□□□ 0.19
CASC4-208ENST00000559151 CEP41Q9BYV8 373 aa16.21■□□□□ 0.19
CASC4-208ENST00000559151 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.21■□□□□ 0.19
CASC4-208ENST00000559151 NOS3P29474 1203 aa16.2■□□□□ 0.18
CASC4-208ENST00000559151 TDRD10Q5VZ19 366 aaKnown RBP16.2■□□□□ 0.18
CASC4-208ENST00000559151 CDPF1Q6NVV7 123 aa16.2■□□□□ 0.18
CASC4-208ENST00000559151 SUCOQ9UBS9 1254 aaKnown RBP16.2■□□□□ 0.18
CASC4-208ENST00000559151 DAGLAQ9Y4D2 1042 aa16.2■□□□□ 0.18
CASC4-208ENST00000559151 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
CASC4-208ENST00000559151 LRIG2O94898 1065 aa16.19■□□□□ 0.18
CASC4-208ENST00000559151 USP11P51784 963 aa16.19■□□□□ 0.18
CASC4-208ENST00000559151 PMS1P54277 932 aaKnown RBP16.19■□□□□ 0.18
CASC4-208ENST00000559151 DHRS1Q96LJ7 313 aa16.19■□□□□ 0.18
CASC4-208ENST00000559151 UBL7Q96S82 380 aaPredicted RBP16.19■□□□□ 0.18
CASC4-208ENST00000559151 ZMYM5Q9UJ78 669 aa16.19■□□□□ 0.18
CASC4-208ENST00000559151 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
CASC4-208ENST00000559151 SUSD5O60279 629 aa16.18■□□□□ 0.18
CASC4-208ENST00000559151 IREB2P48200 963 aaKnown RBP16.18■□□□□ 0.18
CASC4-208ENST00000559151 WFDC12Q8WWY7 111 aa16.18■□□□□ 0.18
CASC4-208ENST00000559151 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
CASC4-208ENST00000559151 C9orf172C9J069 976 aa16.17■□□□□ 0.18
CASC4-208ENST00000559151 SSRP1Q08945 709 aaKnown RBP16.17■□□□□ 0.18
CASC4-208ENST00000559151 FANCLQ9NW38 375 aa16.17■□□□□ 0.18
CASC4-208ENST00000559151 ESYT3A0FGR9 886 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 C9IYK1 514 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 CLEC3AO75596 197 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 APBA3O96018 575 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 TP53P04637 393 aaPredicted RBP16.16■□□□□ 0.18
CASC4-208ENST00000559151 SGO2Q562F6 1265 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 C2orf27AQ580R0 203 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 PPP1R13LQ8WUF5 828 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 FBLIM1Q8WUP2 373 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 FAM46AQ96IP4 442 aaKnown RBP16.16■□□□□ 0.18
CASC4-208ENST00000559151 ZNF512BQ96KM6 892 aaPredicted RBP16.16■□□□□ 0.18
CASC4-208ENST00000559151 NACC1Q96RE7 527 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 SEMA6CQ9H3T2 930 aa16.16■□□□□ 0.18
CASC4-208ENST00000559151 NRG1Q02297 640 aaPredicted RBP16.15■□□□□ 0.18
CASC4-208ENST00000559151 SLC10A6Q3KNW5 377 aa16.15■□□□□ 0.18
CASC4-208ENST00000559151 BBS9Q3SYG4 887 aa16.15■□□□□ 0.18
CASC4-208ENST00000559151 MFSD2AQ8NA29 543 aa16.15■□□□□ 0.18
CASC4-208ENST00000559151 LEMD3Q9Y2U8 911 aa16.15■□□□□ 0.18
CASC4-208ENST00000559151 NFICP08651 508 aa16.14■□□□□ 0.17
CASC4-208ENST00000559151 SQSTM1Q13501 440 aa16.14■□□□□ 0.17
CASC4-208ENST00000559151 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.14■□□□□ 0.17
CASC4-208ENST00000559151 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.14■□□□□ 0.17
CASC4-208ENST00000559151 CDC45O75419 566 aa16.13■□□□□ 0.17
CASC4-208ENST00000559151 THAP3Q8WTV1 239 aaPredicted RBP16.13■□□□□ 0.17
CASC4-208ENST00000559151 ZNF669Q96BR6 464 aaPredicted RBP16.13■□□□□ 0.17
CASC4-208ENST00000559151 MIPEPQ99797 713 aa16.13■□□□□ 0.17
CASC4-208ENST00000559151 MBTPS1Q14703 1052 aa16.12■□□□□ 0.17
CASC4-208ENST00000559151 KRBA1A5PL33 1030 aa16.11■□□□□ 0.17
CASC4-208ENST00000559151 DYNC1LI2O43237 492 aaPredicted RBP16.11■□□□□ 0.17
CASC4-208ENST00000559151 CLSTN1O94985 981 aa16.11■□□□□ 0.17
CASC4-208ENST00000559151 ADGRE1Q14246 886 aa16.11■□□□□ 0.17
CASC4-208ENST00000559151 JMYQ8N9B5 988 aa16.11■□□□□ 0.17
CASC4-208ENST00000559151 DNAJB8Q8NHS0 232 aa16.11■□□□□ 0.17
CASC4-208ENST00000559151 APPBP2Q92624 585 aa16.11■□□□□ 0.17
CASC4-208ENST00000559151 SCARF2Q96GP6 870 aaPredicted RBP16.11■□□□□ 0.17
CASC4-208ENST00000559151 YIPF2Q9BWQ6 316 aa16.11■□□□□ 0.17
CASC4-208ENST00000559151 TMEM260Q9NX78 707 aa16.11■□□□□ 0.17
CASC4-208ENST00000559151 AXDND1Q5T1B0 1012 aaPredicted RBP16.1■□□□□ 0.17
CASC4-208ENST00000559151 EZH1Q92800 747 aaPredicted RBP16.1■□□□□ 0.17
CASC4-208ENST00000559151 MEGF10Q96KG7 1140 aa16.1■□□□□ 0.17
CASC4-208ENST00000559151 SUSD2Q9UGT4 822 aa16.1■□□□□ 0.17
CASC4-208ENST00000559151 CEP131Q9UPN4 1083 aa16.1■□□□□ 0.17
CASC4-208ENST00000559151 PTCH2Q9Y6C5 1203 aa16.1■□□□□ 0.17
CASC4-208ENST00000559151 NCLP19338 710 aaKnown RBP16.09■□□□□ 0.17
CASC4-208ENST00000559151 PLEKHG4Q58EX7 1191 aa16.09■□□□□ 0.17
CASC4-208ENST00000559151 LETMD1Q6P1Q0 360 aa16.09■□□□□ 0.17
CASC4-208ENST00000559151 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
CASC4-208ENST00000559151 CCDC144CPQ8IYA2 1237 aa16.09■□□□□ 0.17
CASC4-208ENST00000559151 RIN3Q8TB24 985 aa16.09■□□□□ 0.17
CASC4-208ENST00000559151 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
CASC4-208ENST00000559151 HAUS7Q99871 368 aa16.09■□□□□ 0.17
CASC4-208ENST00000559151 SPATA9Q9BWV2 254 aa16.09■□□□□ 0.17
CASC4-208ENST00000559151 EPN3Q9H201 632 aa16.09■□□□□ 0.17
CASC4-208ENST00000559151 SLITRK5O94991 958 aa16.08■□□□□ 0.16
CASC4-208ENST00000559151 EPHX1P07099 455 aa16.08■□□□□ 0.16
CASC4-208ENST00000559151 BMP3P12645 472 aa16.08■□□□□ 0.16
CASC4-208ENST00000559151 RXRBP28702 533 aa16.08■□□□□ 0.16
CASC4-208ENST00000559151 UTP4Q969X6 686 aaKnown RBP16.08■□□□□ 0.16
CASC4-208ENST00000559151 PSMG3-AS1Q96PY0 264 aa16.08■□□□□ 0.16
CASC4-208ENST00000559151 MKRN2Q9H000 416 aaKnown RBP16.08■□□□□ 0.16
CASC4-208ENST00000559151 DCAF15Q66K64 600 aa16.07■□□□□ 0.16
CASC4-208ENST00000559151 CDH24Q86UP0 819 aa16.07■□□□□ 0.16
CASC4-208ENST00000559151 ARMC10Q8N2F6 343 aa16.07■□□□□ 0.16
CASC4-208ENST00000559151 MYRFLQ96LU7 910 aa16.07■□□□□ 0.16
CASC4-208ENST00000559151 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
CASC4-208ENST00000559151 CBFA2T2O43439 604 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms