RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 MSL1Q68DK7 614 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 CAVIN1Q6NZI2 390 aaKnown RBP9.97□□□□□ -0.81
COPS2-206ENST00000559016 HHIPL2Q6UWX4 724 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 CATIPQ7Z7H3 387 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 DGKHQ86XP1 1220 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 TRIM22Q8IYM9 498 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 FANCBQ8NB91 859 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 SH3RF3Q8TEJ3 882 aaPredicted RBP9.97□□□□□ -0.81
COPS2-206ENST00000559016 GPR101Q96P66 508 aaPredicted RBP9.97□□□□□ -0.81
COPS2-206ENST00000559016 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
COPS2-206ENST00000559016 MCM9Q9NXL9 1143 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 ZNF646O15015 1829 aaPredicted RBP9.97□□□□□ -0.81
COPS2-206ENST00000559016 SNED1Q8TER0 1413 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 MYH8P13535 1937 aa9.96□□□□□ -0.81
COPS2-206ENST00000559016 RANBP6O60518 1105 aaKnown RBP9.96□□□□□ -0.82
COPS2-206ENST00000559016 ADD1P35611 737 aaKnown RBP9.96□□□□□ -0.82
COPS2-206ENST00000559016 RHBDL3P58872 404 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 TRIM29Q14134 588 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 ZSCAN23Q3MJ62 389 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 IFIT1BQ5T764 474 aaKnown RBP9.96□□□□□ -0.82
COPS2-206ENST00000559016 SOGA3Q5TF21 947 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 ADGRD1Q6QNK2 874 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 MICU3Q86XE3 530 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 TEX11Q8IYF3 940 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 RTKN2Q8IZC4 609 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 ZNF654Q8IZM8 581 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 NKX2-3Q8TAU0 364 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
COPS2-206ENST00000559016 SPATA32Q96LK8 384 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 RNF26Q9BY78 433 aaPredicted RBP9.96□□□□□ -0.82
COPS2-206ENST00000559016 INCENPQ9NQS7 918 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 FAM217BQ9NTX9 383 aaPredicted RBP9.96□□□□□ -0.82
COPS2-206ENST00000559016 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
COPS2-206ENST00000559016 RCOR1Q9UKL0 485 aa9.96□□□□□ -0.82
COPS2-206ENST00000559016 TSPY2A6NKD2 308 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
COPS2-206ENST00000559016 FIBPO43427 364 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 DEXIO95424 95 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 POLR3DP05423 398 aaPredicted RBP9.95□□□□□ -0.82
COPS2-206ENST00000559016 XBP1P17861 261 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 CDC27P30260 824 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 KIAA2012Q0VF49 1180 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 DIXDC1Q155Q3 683 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 GRIK5Q16478 980 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 FERMT3Q86UX7 667 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 ZNF444Q8N0Y2 327 aaPredicted RBP9.95□□□□□ -0.82
COPS2-206ENST00000559016 FAM177A1Q8N128 213 aaPredicted RBP9.95□□□□□ -0.82
COPS2-206ENST00000559016 CRACR2BQ8N4Y2 399 aaPredicted RBP9.95□□□□□ -0.82
COPS2-206ENST00000559016 ENAHQ8N8S7 591 aaPredicted RBP9.95□□□□□ -0.82
COPS2-206ENST00000559016 TGFBRAP1Q8WUH2 860 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 LEO1Q8WVC0 666 aaPredicted RBP9.95□□□□□ -0.82
COPS2-206ENST00000559016 ALG1Q9BT22 464 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 JAG2Q9Y219 1238 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 MYO3BQ8WXR4 1341 aa9.95□□□□□ -0.82
COPS2-206ENST00000559016 GOLGA6L4A6NEF3 574 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 GADD45BO75293 160 aaPredicted RBP9.94□□□□□ -0.82
COPS2-206ENST00000559016 YEATS4O95619 227 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 USP17L8P0C7I0 530 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 KIF5BP33176 963 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 GNAQP50148 359 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 TGFB2P61812 414 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 TROAPQ12815 778 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 CCDC183Q5T5S1 534 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 LRSAM1Q6UWE0 723 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 C16orf86Q6ZW13 317 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 NBPF11Q86T75 865 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 TTLL6Q8N841 843 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 TEKT1Q969V4 418 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 ZDHHC15Q96MV8 337 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 PSMD1Q99460 953 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 ZKSCAN3Q9BRR0 538 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 GRPEL1Q9HAV7 217 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 MKNK2Q9HBH9 465 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 SENP2Q9HC62 589 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 GDPD2Q9HCC8 539 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 RTEL1Q9NZ71 1219 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 TMEM63CQ9P1W3 806 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 TTF2Q9UNY4 1162 aaKnown RBP9.94□□□□□ -0.82
COPS2-206ENST00000559016 DAGLAQ9Y4D2 1042 aa9.94□□□□□ -0.82
COPS2-206ENST00000559016 FLT1P17948 1338 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 CYP2D7A0A087X1C5 515 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 TK2O00142 265 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 PRPF3O43395 683 aaKnown RBP9.93□□□□□ -0.82
COPS2-206ENST00000559016 TBC1D12O60347 775 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 U2AF2P26368 475 aaKnown RBP eCLIP9.93□□□□□ -0.82
COPS2-206ENST00000559016 MMP14P50281 582 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 AKAP17AQ02040 695 aaKnown RBP9.93□□□□□ -0.82
COPS2-206ENST00000559016 KIF23Q02241 960 aaPredicted RBP9.93□□□□□ -0.82
COPS2-206ENST00000559016 SAFBQ15424 915 aaKnown RBP eCLIP9.93□□□□□ -0.82
COPS2-206ENST00000559016 FOXD4L6Q3SYB3 417 aaPredicted RBP9.93□□□□□ -0.82
COPS2-206ENST00000559016 CCDC93Q567U6 631 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 PPP4R3BQ5MIZ7 849 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 FOXD4L3Q6VB84 417 aaPredicted RBP9.93□□□□□ -0.82
COPS2-206ENST00000559016 SLC51AQ86UW1 340 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 CERS5Q8N5B7 392 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 CTCFLQ8NI51 663 aaPredicted RBP9.93□□□□□ -0.82
COPS2-206ENST00000559016 CHAMP1Q96JM3 812 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 POLR3EQ9NVU0 708 aa9.93□□□□□ -0.82
COPS2-206ENST00000559016 SWAP70Q9UH65 585 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms