RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 INTS4Q96HW7 963 aaKnown RBP9.37□□□□□ -0.91
RTF1-205ENST00000558298 TIGD1Q96MW7 591 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 PTPN18Q99952 460 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 DCP1AQ9NPI6 582 aaPredicted RBP9.37□□□□□ -0.91
RTF1-205ENST00000558298 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
RTF1-205ENST00000558298 NAP1L2Q9ULW6 460 aaPredicted RBP9.37□□□□□ -0.91
RTF1-205ENST00000558298 ATP6V1DQ9Y5K8 247 aa9.37□□□□□ -0.91
RTF1-205ENST00000558298 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
RTF1-205ENST00000558298 HIP1O00291 1037 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 CTIFO43310 598 aaKnown RBP9.36□□□□□ -0.91
RTF1-205ENST00000558298 TRPA1O75762 1119 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 PPATQ06203 517 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 TCP10Q12799 353 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 PPIL2Q13356 520 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 SBK1Q52WX2 424 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 ZNF771Q7L3S4 317 aaPredicted RBP9.36□□□□□ -0.91
RTF1-205ENST00000558298 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 ERO1BQ86YB8 467 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 IFNL1Q8IU54 200 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 LCORLQ8N3X6 602 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 TGFBRAP1Q8WUH2 860 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 OSBP2Q969R2 916 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 OPTNQ96CV9 577 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 SLC10A4Q96EP9 437 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 WRNIP1Q96S55 665 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 STRBPQ96SI9 672 aaKnown RBP9.36□□□□□ -0.91
RTF1-205ENST00000558298 FSD1Q9BTV5 496 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 PUS7LQ9H0K6 701 aaKnown RBP9.36□□□□□ -0.91
RTF1-205ENST00000558298 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 ELP3Q9H9T3 547 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 HELLSQ9NRZ9 838 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 ARPP21Q9UBL0 812 aaPredicted RBP9.36□□□□□ -0.91
RTF1-205ENST00000558298 ZHX1Q9UKY1 873 aaPredicted RBP9.36□□□□□ -0.91
RTF1-205ENST00000558298 KCNH4Q9UQ05 1017 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 CSADQ9Y600 493 aa9.36□□□□□ -0.91
RTF1-205ENST00000558298 RAD50Q92878 1312 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 GPAA1O43292 621 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 MBD4O95243 580 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 CAVIN2O95810 425 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 TUBB4AP04350 444 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 INPP5BP32019 993 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 DYNLL1P63167 89 aaKnown RBP9.35□□□□□ -0.91
RTF1-205ENST00000558298 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
RTF1-205ENST00000558298 PICALMQ13492 652 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 MOGSQ13724 837 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 TTC22Q5TAA0 569 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 SCYL3Q8IZE3 742 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 MIGA1Q8NAN2 632 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 BRI3BPQ8WY22 251 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 ZKSCAN4Q969J2 545 aaPredicted RBP9.35□□□□□ -0.91
RTF1-205ENST00000558298 R3HDMLQ9H3Y0 253 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 DNAJC18Q9H819 358 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 SERPINB13Q9UIV8 391 aa9.35□□□□□ -0.91
RTF1-205ENST00000558298 KIF2AO00139 706 aaPredicted RBP9.34□□□□□ -0.91
RTF1-205ENST00000558298 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 ASNSP08243 561 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 GSPT1P15170 499 aaKnown RBP9.34□□□□□ -0.91
RTF1-205ENST00000558298 MCCP23508 829 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 USP5P45974 858 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 ALX1Q15699 326 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 MIGA2Q7L4E1 593 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 MAPKAPK5Q8IW41 473 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 PLIN4Q96Q06 1357 aa9.34□□□□□ -0.91
RTF1-205ENST00000558298 ADGRA2Q96PE1 1338 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 SMTNL1A8MU46 457 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 GSG1L2A8MUP6 293 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 GPR25O00155 361 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 CXCL11O14625 94 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 IRF6O14896 467 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 FOXP2O15409 715 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 CAP2P40123 477 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 GTF2A2P52657 109 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 ANAPC15P60006 121 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 SLFNL1Q499Z3 407 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 C12orf60Q5U649 245 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 ZSCAN29Q8IWY8 852 aaPredicted RBP9.33□□□□□ -0.92
RTF1-205ENST00000558298 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 ZNF296Q8WUU4 475 aaPredicted RBP9.33□□□□□ -0.92
RTF1-205ENST00000558298 OTUD5Q96G74 571 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 ARMT1Q9H993 441 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 SLC45A1Q9Y2W3 748 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.33□□□□□ -0.92
RTF1-205ENST00000558298 ZSWIM8A7E2V4 1837 aa9.33□□□□□ -0.92
RTF1-205ENST00000558298 RBBP6Q7Z6E9 1792 aaKnown RBP9.32□□□□□ -0.92
RTF1-205ENST00000558298 PATL2C9JE40 543 aaKnown RBP9.32□□□□□ -0.92
RTF1-205ENST00000558298 M0R2C6 588 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 NEMFO60524 1076 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 TBC1D8O95759 1140 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 CHGBP05060 677 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 PCP11498 1178 aaKnown RBP9.32□□□□□ -0.92
RTF1-205ENST00000558298 PTPRAP18433 802 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 SDSP20132 328 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 CAP1Q01518 475 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 RRP1BQ14684 758 aaKnown RBP9.32□□□□□ -0.92
RTF1-205ENST00000558298 MCMDC2Q4G0Z9 681 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 CCDC183Q5T5S1 534 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms