RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
ALPK3-202ENST00000558077 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.2
ALPK3-202ENST00000558077 KIAA1683Q9H0B3 1180 aa16.27■□□□□ 0.2
ALPK3-202ENST00000558077 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
ALPK3-202ENST00000558077 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
ALPK3-202ENST00000558077 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
ALPK3-202ENST00000558077 GNAT2P19087 354 aa16.26■□□□□ 0.19
ALPK3-202ENST00000558077 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
ALPK3-202ENST00000558077 TICAM2Q86XR7 235 aa16.26■□□□□ 0.19
ALPK3-202ENST00000558077 CLEC10AQ8IUN9 316 aa16.26■□□□□ 0.19
ALPK3-202ENST00000558077 FAM227BQ96M60 508 aa16.26■□□□□ 0.19
ALPK3-202ENST00000558077 CABP5Q9NP86 173 aa16.26■□□□□ 0.19
ALPK3-202ENST00000558077 TNRC18O15417 2968 aaPredicted RBP16.26■□□□□ 0.19
ALPK3-202ENST00000558077 RLFQ13129 1914 aa16.25■□□□□ 0.19
ALPK3-202ENST00000558077 A0A0D9SFI3 127 aa16.25■□□□□ 0.19
ALPK3-202ENST00000558077 RASA1P20936 1047 aa16.25■□□□□ 0.19
ALPK3-202ENST00000558077 KIAA1755Q5JYT7 1200 aa16.25■□□□□ 0.19
ALPK3-202ENST00000558077 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
ALPK3-202ENST00000558077 TMEM179Q6ZVK1 233 aa16.25■□□□□ 0.19
ALPK3-202ENST00000558077 CCDC17Q96LX7 622 aa16.25■□□□□ 0.19
ALPK3-202ENST00000558077 P2RX7Q99572 595 aaKnown RBP16.25■□□□□ 0.19
ALPK3-202ENST00000558077 TMOD4Q9NZQ9 345 aa16.25■□□□□ 0.19
ALPK3-202ENST00000558077 PEX10O60683 326 aa16.24■□□□□ 0.19
ALPK3-202ENST00000558077 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
ALPK3-202ENST00000558077 PSMC4P43686 418 aa16.24■□□□□ 0.19
ALPK3-202ENST00000558077 PRPF38BQ5VTL8 546 aaKnown RBP16.24■□□□□ 0.19
ALPK3-202ENST00000558077 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
ALPK3-202ENST00000558077 HELLSQ9NRZ9 838 aa16.24■□□□□ 0.19
ALPK3-202ENST00000558077 TACC3Q9Y6A5 838 aa16.24■□□□□ 0.19
ALPK3-202ENST00000558077 PTCH2Q9Y6C5 1203 aa16.24■□□□□ 0.19
ALPK3-202ENST00000558077 KIAA0100Q14667 2235 aaKnown RBP16.23■□□□□ 0.19
ALPK3-202ENST00000558077 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
ALPK3-202ENST00000558077 MPHOSPH10O00566 681 aaKnown RBP16.23■□□□□ 0.19
ALPK3-202ENST00000558077 OSBPP22059 807 aa16.23■□□□□ 0.19
ALPK3-202ENST00000558077 NMIQ13287 307 aaPredicted RBP16.23■□□□□ 0.19
ALPK3-202ENST00000558077 PABPC4Q13310 644 aaKnown RBP eCLIP16.23■□□□□ 0.19
ALPK3-202ENST00000558077 ZYXQ15942 572 aaKnown RBP16.23■□□□□ 0.19
ALPK3-202ENST00000558077 ANKRD13CQ8N6S4 541 aa16.23■□□□□ 0.19
ALPK3-202ENST00000558077 TXNRD2Q9NNW7 524 aa16.23■□□□□ 0.19
ALPK3-202ENST00000558077 MORF4L1Q9UBU8 362 aa16.23■□□□□ 0.19
ALPK3-202ENST00000558077 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
ALPK3-202ENST00000558077 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 GNRH1P01148 92 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 APPP05067 770 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 VCAM1P19320 739 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 SDSP20132 328 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 GCLCP48506 637 aaPredicted RBP16.22■□□□□ 0.19
ALPK3-202ENST00000558077 TDO2P48775 406 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 KIF22Q14807 665 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 FAM110CQ1W6H9 321 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 ZNF589Q86UQ0 364 aaPredicted RBP16.22■□□□□ 0.19
ALPK3-202ENST00000558077 AMOTL1Q8IY63 956 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
ALPK3-202ENST00000558077 ARMC5Q96C12 935 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 RBPJLQ9UBG7 517 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 TMX2Q9Y320 296 aa16.22■□□□□ 0.19
ALPK3-202ENST00000558077 PDE4DIPQ5VU43 2346 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 IGKV6D-41A0A0C4DH26 115 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 GSPT1P15170 499 aaKnown RBP16.21■□□□□ 0.19
ALPK3-202ENST00000558077 USP14P54578 494 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 HERVK_113P62684 666 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 ARHGEF6Q15052 776 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 ALX1Q15699 326 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 Q3C1V9 767 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 MCMDC2Q4G0Z9 681 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 STK11IPQ8N1F8 1099 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 RILPL2Q969X0 211 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 FEZ1Q99689 392 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 GABRQQ9UN88 632 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 PLXNB2O15031 1838 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 PARP14Q460N5 1801 aa16.21■□□□□ 0.19
ALPK3-202ENST00000558077 CENPFP49454 3210 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L15C9J2P7 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L13C9JLJ4 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L11C9JVI0 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L18D6R9N7 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L22D6RA61 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L17D6RBQ6 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L19D6RCP7 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L20D6RJB6 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 CNMDO75829 334 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 EEF2P13639 858 aaKnown RBP16.2■□□□□ 0.18
ALPK3-202ENST00000558077 PRMT2P55345 433 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 IRX3P78415 501 aaPredicted RBP16.2■□□□□ 0.18
ALPK3-202ENST00000558077 PPARAQ07869 468 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 USP17L24Q0WX57 530 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 INCENPQ9NQS7 918 aa16.2■□□□□ 0.18
ALPK3-202ENST00000558077 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.2■□□□□ 0.18
ALPK3-202ENST00000558077 PRDM1O75626 825 aa16.19■□□□□ 0.18
ALPK3-202ENST00000558077 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
ALPK3-202ENST00000558077 FCGRTP55899 365 aa16.19■□□□□ 0.18
ALPK3-202ENST00000558077 ICA1Q05084 483 aa16.19■□□□□ 0.18
ALPK3-202ENST00000558077 PRKCZQ05513 592 aa16.19■□□□□ 0.18
ALPK3-202ENST00000558077 TTC22Q5TAA0 569 aa16.19■□□□□ 0.18
ALPK3-202ENST00000558077 NACAP1Q9BZK3 213 aa16.19■□□□□ 0.18
ALPK3-202ENST00000558077 NAPBQ9H115 298 aa16.19■□□□□ 0.18
ALPK3-202ENST00000558077 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
ALPK3-202ENST00000558077 KANSL2Q9H9L4 492 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms