RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 KRT23Q9C075 422 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 FOXP1Q9H334 677 aaPredicted RBP15.1■□□□□ 0.01
CPNE6-204ENST00000557829 FANCLQ9NW38 375 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 RANBP6O60518 1105 aaKnown RBP15.09■□□□□ 0.01
CPNE6-204ENST00000557829 APPP05067 770 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 PTPREP23469 700 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 SARSP49591 514 aaKnown RBP15.09■□□□□ 0.01
CPNE6-204ENST00000557829 RILPL1Q5EBL4 403 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 ISM2Q6H9L7 571 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 TMEM139Q8IV31 216 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 NOSTRINQ8IVI9 506 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 LPIN2Q92539 896 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 PHKBQ93100 1093 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 SLC12A7Q9Y666 1083 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 MICU3Q86XE3 530 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 CLIC6Q96NY7 704 aa15.09■□□□□ 0.01
CPNE6-204ENST00000557829 MMP1P03956 469 aa15.08■□□□□ 0.01
CPNE6-204ENST00000557829 ZNF18P17022 549 aa15.08■□□□□ 0.01
CPNE6-204ENST00000557829 PHKA1P46020 1223 aa15.08■□□□□ 0.01
CPNE6-204ENST00000557829 CLCN6P51797 869 aa15.08■□□□□ 0.01
CPNE6-204ENST00000557829 ARHGAP29Q52LW3 1261 aa15.08■□□□□ 0.01
CPNE6-204ENST00000557829 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0.01
CPNE6-204ENST00000557829 PPP2R2CQ9Y2T4 447 aa15.08■□□□□ 0.01
CPNE6-204ENST00000557829 TADA3O75528 432 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 IDH1O75874 414 aaKnown RBP15.08■□□□□ 0
CPNE6-204ENST00000557829 ZRANB2O95218 330 aaKnown RBP eCLIP15.08■□□□□ 0
CPNE6-204ENST00000557829 SLC5A1P13866 664 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 GRAPQ13588 217 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 TMTC2Q8N394 836 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 MNS1Q8NEH6 495 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 GRAPLQ8TC17 118 aaPredicted RBP15.08■□□□□ 0
CPNE6-204ENST00000557829 RPGRQ92834 1020 aaKnown RBP15.08■□□□□ 0
CPNE6-204ENST00000557829 AIDAQ96BJ3 306 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 MAN1B1Q9UKM7 699 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 CEP131Q9UPN4 1083 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 FHOD1Q9Y613 1164 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 PARP3Q9Y6F1 533 aa15.08■□□□□ 0
CPNE6-204ENST00000557829 KLRG2A4D1S0 409 aaPredicted RBP15.07■□□□□ 0
CPNE6-204ENST00000557829 MORC3Q14149 939 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 POSTNQ15063 836 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 TRIM22Q8IYM9 498 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 IFNL3Q8IZI9 196 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 STK11IPQ8N1F8 1099 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 NKX2-3Q8TAU0 364 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 BAG1Q99933 345 aaPredicted RBP15.07■□□□□ 0
CPNE6-204ENST00000557829 SLC26A6Q9BXS9 759 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 SENP2Q9HC62 589 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 ZSWIM5Q9P217 1185 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 FBXO2Q9UK22 296 aaPredicted RBP15.07■□□□□ 0
CPNE6-204ENST00000557829 CCDC196A0A1B0GTZ2 297 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 VWA3AA6NCI4 1184 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 IFIT3O14879 490 aaKnown RBP15.07■□□□□ 0
CPNE6-204ENST00000557829 GNAT2P19087 354 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 BMP6P22004 513 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 ERCC5P28715 1186 aaPredicted RBP15.07■□□□□ 0
CPNE6-204ENST00000557829 SLC20A2Q08357 652 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 SPECC1LQ69YQ0 1117 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 BRIP1Q9BX63 1249 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 INTS13Q9NVM9 706 aa15.07■□□□□ 0
CPNE6-204ENST00000557829 NRXN2Q9P2S2 1712 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 MYH6P13533 1939 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 TMEM232C9JQI7 657 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 DEXIO95424 95 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 RXRAP19793 462 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 TOB1P50616 345 aaPredicted RBP15.06■□□□□ 0
CPNE6-204ENST00000557829 MAP3K9P80192 1104 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 PDE4BQ07343 736 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 MAP3K12Q12852 859 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 PPP2R5BQ15173 497 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 TMCO3Q6UWJ1 677 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 LRRN4CLQ8ND94 238 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 SMARCE1Q969G3 411 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 CCDC34Q96HJ3 373 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 NAPBQ9H115 298 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 WWC3Q9ULE0 1092 aa15.06■□□□□ 0
CPNE6-204ENST00000557829 SRPRBQ9Y5M8 271 aaKnown RBP15.06■□□□□ 0
CPNE6-204ENST00000557829 IGSF3O75054 1194 aa15.05■□□□□ 0
CPNE6-204ENST00000557829 URI1O94763 535 aaPredicted RBP15.05■□□□□ 0
CPNE6-204ENST00000557829 PNMA6AP0CW24 399 aaPredicted RBP15.05■□□□□ 0
CPNE6-204ENST00000557829 PTGER2P43116 358 aa15.05■□□□□ 0
CPNE6-204ENST00000557829 SART3Q15020 963 aaKnown RBP15.05■□□□□ 0
CPNE6-204ENST00000557829 SPATA20Q8TB22 786 aa15.05■□□□□ 0
CPNE6-204ENST00000557829 STAG1Q8WVM7 1258 aa15.05■□□□□ 0
CPNE6-204ENST00000557829 HOXA10P31260 410 aaPredicted RBP15.05■□□□□ -0
CPNE6-204ENST00000557829 CASQ1P31415 396 aa15.05■□□□□ -0
CPNE6-204ENST00000557829 BCAMP50895 628 aa15.05■□□□□ -0
CPNE6-204ENST00000557829 MFSD6Q6ZSS7 791 aa15.05■□□□□ -0
CPNE6-204ENST00000557829 DIS3L2Q8IYB7 885 aaKnown RBP15.05■□□□□ -0
CPNE6-204ENST00000557829 TC2NQ8N9U0 490 aa15.05■□□□□ -0
CPNE6-204ENST00000557829 RBM17Q96I25 401 aaKnown RBP15.05■□□□□ -0
CPNE6-204ENST00000557829 ANKRD31Q8N7Z5 1873 aa15.04■□□□□ -0
CPNE6-204ENST00000557829 BTBD18B2RXH4 712 aa15.04■□□□□ -0
CPNE6-204ENST00000557829 CDK11BP21127 795 aaKnown RBP15.04■□□□□ -0
CPNE6-204ENST00000557829 KLRK1P26718 216 aa15.04■□□□□ -0
CPNE6-204ENST00000557829 RTN1Q16799 776 aa15.04■□□□□ -0
CPNE6-204ENST00000557829 GPR161Q8N6U8 529 aaKnown RBP15.04■□□□□ -0
CPNE6-204ENST00000557829 SPATA5Q8NB90 893 aa15.04■□□□□ -0
CPNE6-204ENST00000557829 EPB41L4AQ9HCS5 686 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms