RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SNAPC2Q13487 334 aa16.65■□□□□ 0.26
SUPT16H-208ENST00000557652 RRP1BQ14684 758 aaKnown RBP16.65■□□□□ 0.26
SUPT16H-208ENST00000557652 SART3Q15020 963 aaKnown RBP16.65■□□□□ 0.26
SUPT16H-208ENST00000557652 IL17RAQ96F46 866 aa16.65■□□□□ 0.26
SUPT16H-208ENST00000557652 CAPNS2Q96L46 248 aa16.65■□□□□ 0.26
SUPT16H-208ENST00000557652 ZCCHC17Q9NP64 241 aaKnown RBP16.65■□□□□ 0.26
SUPT16H-208ENST00000557652 ZHX2Q9Y6X8 837 aa16.65■□□□□ 0.26
SUPT16H-208ENST00000557652 FAM155AB1AL88 458 aaPredicted RBP16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 SMIM22K7EJ46 135 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 PRDM1O75626 825 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 TTLL1O95922 423 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 CETPP11597 493 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 NOVP48745 357 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 SREBF2Q12772 1141 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 FASTKD5Q7L8L6 764 aaKnown RBP16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 DGKHQ86XP1 1220 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 MKL1Q969V6 931 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 KIAA1683Q9H0B3 1180 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 NEDD4P46934 1319 aa16.64■□□□□ 0.25
SUPT16H-208ENST00000557652 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 GUCY1A2P33402 732 aa16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 BACE1P56817 501 aa16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 SEPT2Q15019 361 aa16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 RRP12Q5JTH9 1297 aaKnown RBP16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 PAXIP1Q6ZW49 1069 aaPredicted RBP16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 PROCA1Q8NCQ7 364 aaPredicted RBP16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 LPAR1Q92633 364 aa16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 TM6SF1Q9BZW5 370 aa16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
SUPT16H-208ENST00000557652 A0A0G2JLL6 359 aaPredicted RBP16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 B4E1Z4 1266 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 IRF6O14896 467 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 KDM4AO75164 1064 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 MCM5P33992 734 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 OTUD7BQ6GQQ9 843 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 PRRT2Q7Z6L0 340 aaPredicted RBP16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 TMTC2Q8N394 836 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 ANKS1AQ92625 1134 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 TMEM87BQ96K49 555 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 C12orf42Q96LP6 360 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 NEK1Q96PY6 1258 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 UBAC1Q9BSL1 405 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 ZSWIM5Q9P217 1185 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 SLC45A1Q9Y2W3 748 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 TMX2Q9Y320 296 aa16.62■□□□□ 0.25
SUPT16H-208ENST00000557652 ERICH2A1L162 156 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 SPP2Q13103 211 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 CYP4F22Q6NT55 531 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 MB21D2Q8IYB1 491 aaPredicted RBP16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 STK11IPQ8N1F8 1099 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 CEP95Q96GE4 821 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 FEZ1Q99689 392 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 BACH2Q9BYV9 841 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 GOPCQ9HD26 462 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
SUPT16H-208ENST00000557652 ALDH1A1P00352 501 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 TM4SF4P48230 202 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 JAG1P78504 1218 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 FBXL16Q8N461 479 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 MS4A4AQ96JQ5 239 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 ZSCAN10Q96SZ4 725 aaPredicted RBP16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 TMOD4Q9NZQ9 345 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 SNX14Q9Y5W7 946 aa16.6■□□□□ 0.25
SUPT16H-208ENST00000557652 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 GJA5P36382 358 aa16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 VEGFBP49765 207 aa16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 RASEFQ8IZ41 740 aa16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 GMCL1P1Q8NEA9 526 aa16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 INCENPQ9NQS7 918 aa16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 IL17RBQ9NRM6 502 aa16.59■□□□□ 0.25
SUPT16H-208ENST00000557652 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 TRIM75PA6NK02 468 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 LIFRP42702 1097 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 RBM25P49756 843 aaKnown RBP16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 MAP2K1Q02750 393 aaPredicted RBP16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 MTMR2Q13614 643 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 CCL15Q16663 113 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 RCSD1Q6JBY9 416 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 BLOC1S2Q6QNY1 142 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 ANKRD23Q86SG2 305 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 STX8Q9UNK0 236 aa16.58■□□□□ 0.24
SUPT16H-208ENST00000557652 PARP14Q460N5 1801 aa16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 TNKSO95271 1327 aa16.57■□□□□ 0.24
SUPT16H-208ENST00000557652 WDR46O15213 610 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms