RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PLIN4Q96Q06 1357 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 RASSF10A6NK89 507 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 ICA1Q05084 483 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 WNK4Q96J92 1243 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 NEK1Q96PY6 1258 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 C22orf23Q9BZE7 217 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 A0A1W2PRG0 241 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 ECE1P42892 770 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 ANTXR2P58335 489 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 ATP2B2Q01814 1243 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 PPATQ06203 517 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 SPP2Q13103 211 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 KRT32Q14532 448 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 HHIPL1Q96JK4 782 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 KANSL2Q9H9L4 492 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 GINM1Q9NU53 330 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 MTMR4Q9NYA4 1195 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 AFG3L2Q9Y4W6 797 aa18.03■□□□□ 0.48
NEDD1-213ENST00000557644 FAM155AB1AL88 458 aaPredicted RBP18.02■□□□□ 0.48
NEDD1-213ENST00000557644 EEF2P13639 858 aaKnown RBP18.02■□□□□ 0.48
NEDD1-213ENST00000557644 SPRYD7Q5W111 196 aa18.02■□□□□ 0.48
NEDD1-213ENST00000557644 TCEANC2Q96MN5 208 aa18.02■□□□□ 0.48
NEDD1-213ENST00000557644 GREB1LQ9C091 1923 aaPredicted RBP18.02■□□□□ 0.47
NEDD1-213ENST00000557644 SLC10A3P09131 477 aa18.02■□□□□ 0.47
NEDD1-213ENST00000557644 DGKZQ13574 1117 aa18.02■□□□□ 0.47
NEDD1-213ENST00000557644 ZNF280CQ8ND82 737 aa18.02■□□□□ 0.47
NEDD1-213ENST00000557644 LRRC2Q9BYS8 371 aa18.01■□□□□ 0.47
NEDD1-213ENST00000557644 UPF2Q9HAU5 1272 aaKnown RBP18.01■□□□□ 0.47
NEDD1-213ENST00000557644 CLIP2Q9UDT6 1046 aa18.01■□□□□ 0.47
NEDD1-213ENST00000557644 STX8Q9UNK0 236 aa18.01■□□□□ 0.47
NEDD1-213ENST00000557644 CASTP20810 708 aaKnown RBP18.01■□□□□ 0.47
NEDD1-213ENST00000557644 PPIL2Q13356 520 aa18.01■□□□□ 0.47
NEDD1-213ENST00000557644 ZYXQ15942 572 aaKnown RBP18.01■□□□□ 0.47
NEDD1-213ENST00000557644 IQCA1Q86XH1 822 aa18.01■□□□□ 0.47
NEDD1-213ENST00000557644 ZSCAN10Q96SZ4 725 aaPredicted RBP18.01■□□□□ 0.47
NEDD1-213ENST00000557644 ZIC5Q96T25 663 aa18.01■□□□□ 0.47
NEDD1-213ENST00000557644 GPHNQ9NQX3 736 aaPredicted RBP18.01■□□□□ 0.47
NEDD1-213ENST00000557644 PRC1O43663 620 aa18■□□□□ 0.47
NEDD1-213ENST00000557644 MTMR2Q13614 643 aa18■□□□□ 0.47
NEDD1-213ENST00000557644 RCSD1Q6JBY9 416 aa18■□□□□ 0.47
NEDD1-213ENST00000557644 CAPNS2Q96L46 248 aa18■□□□□ 0.47
NEDD1-213ENST00000557644 WDR18Q9BV38 432 aa18■□□□□ 0.47
NEDD1-213ENST00000557644 UPF3BQ9BZI7 483 aaKnown RBP18■□□□□ 0.47
NEDD1-213ENST00000557644 TCP11L1Q9NUJ3 509 aa18■□□□□ 0.47
NEDD1-213ENST00000557644 PHIPQ8WWQ0 1821 aa18■□□□□ 0.47
NEDD1-213ENST00000557644 TNKSO95271 1327 aa18■□□□□ 0.47
NEDD1-213ENST00000557644 TTLL1O95922 423 aa17.99■□□□□ 0.47
NEDD1-213ENST00000557644 MCM5P33992 734 aa17.99■□□□□ 0.47
NEDD1-213ENST00000557644 ANAPC15P60006 121 aa17.99■□□□□ 0.47
NEDD1-213ENST00000557644 ENAHQ8N8S7 591 aaPredicted RBP17.99■□□□□ 0.47
NEDD1-213ENST00000557644 CCDC102AQ96A19 550 aa17.99■□□□□ 0.47
NEDD1-213ENST00000557644 UBAC1Q9BSL1 405 aa17.99■□□□□ 0.47
NEDD1-213ENST00000557644 AS3MTQ9HBK9 375 aa17.99■□□□□ 0.47
NEDD1-213ENST00000557644 ZBTB48P10074 688 aaPredicted RBP17.99■□□□□ 0.47
NEDD1-213ENST00000557644 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
NEDD1-213ENST00000557644 LRRC47Q8N1G4 583 aaKnown RBP17.99■□□□□ 0.47
NEDD1-213ENST00000557644 SENP2Q9HC62 589 aa17.99■□□□□ 0.47
NEDD1-213ENST00000557644 NOVP48745 357 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 NT5C2P49902 561 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 DHX32Q7L7V1 743 aaKnown RBP17.98■□□□□ 0.47
NEDD1-213ENST00000557644 KIF2CQ99661 725 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 FEZ1Q99689 392 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 NYAP2Q9P242 653 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 KCNH4Q9UQ05 1017 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 USP17L10C9JJH3 530 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 IFIT3O14879 490 aaKnown RBP17.98■□□□□ 0.47
NEDD1-213ENST00000557644 AOC2O75106 756 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 VEGFBP49765 207 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 HMGCS2P54868 508 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 BACE1P56817 501 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 EXOSC10Q01780 885 aaKnown RBP17.98■□□□□ 0.47
NEDD1-213ENST00000557644 SEC23AQ15436 765 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 CHMP4CQ96CF2 233 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 MS4A4AQ96JQ5 239 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 TBC1D32Q96NH3 1257 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 ARHGEF10LQ9HCE6 1279 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 ZSWIM6Q9HCJ5 1215 aa17.98■□□□□ 0.47
NEDD1-213ENST00000557644 PSMA5P28066 241 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 KIAA1755Q5JYT7 1200 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 IGDCC4Q8TDY8 1250 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 TMEM47Q9BQJ4 181 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 TMX2Q9Y320 296 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 HMGB1P09429 215 aaKnown RBP17.97■□□□□ 0.47
NEDD1-213ENST00000557644 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 TMEM67Q5HYA8 995 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 IL17RAQ96F46 866 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 TM6SF1Q9BZW5 370 aa17.97■□□□□ 0.47
NEDD1-213ENST00000557644 CXCL11O14625 94 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 RAD21O60216 631 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 SNAPC2Q13487 334 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 RUFY3Q7L099 469 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 RASGRP2Q7LDG7 609 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 DGKHQ86XP1 1220 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 SPICE1Q8N0Z3 855 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 MKL1Q969V6 931 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 KIAA1683Q9H0B3 1180 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms