RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 ZNF384Q8TF68 577 aa9.94□□□□□ -0.82
PCNX1-215ENST00000557428 FERMT2Q96AC1 680 aa9.94□□□□□ -0.82
PCNX1-215ENST00000557428 AATFQ9NY61 560 aaKnown RBP eCLIP9.94□□□□□ -0.82
PCNX1-215ENST00000557428 LRP2BPQ9P2M1 347 aa9.94□□□□□ -0.82
PCNX1-215ENST00000557428 PI4KBQ9UBF8 816 aa9.94□□□□□ -0.82
PCNX1-215ENST00000557428 ZBTB21Q9ULJ3 1066 aa9.94□□□□□ -0.82
PCNX1-215ENST00000557428 JAG1P78504 1218 aa9.93□□□□□ -0.82
PCNX1-215ENST00000557428 TFCP2Q12800 502 aa9.93□□□□□ -0.82
PCNX1-215ENST00000557428 SLC39A5Q6ZMH5 540 aa9.93□□□□□ -0.82
PCNX1-215ENST00000557428 SH3RF1Q7Z6J0 888 aa9.93□□□□□ -0.82
PCNX1-215ENST00000557428 NPLOC4Q8TAT6 608 aa9.93□□□□□ -0.82
PCNX1-215ENST00000557428 TGFBRAP1Q8WUH2 860 aa9.93□□□□□ -0.82
PCNX1-215ENST00000557428 NSUN4Q96CB9 384 aaKnown RBP9.93□□□□□ -0.82
PCNX1-215ENST00000557428 PDLIM7Q9NR12 457 aa9.93□□□□□ -0.82
PCNX1-215ENST00000557428 HMG20BQ9P0W2 317 aa9.93□□□□□ -0.82
PCNX1-215ENST00000557428 MYO5AQ9Y4I1 1855 aaKnown RBP9.93□□□□□ -0.82
PCNX1-215ENST00000557428 FLT1P17948 1338 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 SLC15A5A6NIM6 579 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 CNMDO75829 334 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 MAP4K4O95819 1239 aaPredicted RBP9.92□□□□□ -0.82
PCNX1-215ENST00000557428 HLA-DOAP06340 250 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 PTPREP23469 700 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 ADCYAP1R1P41586 468 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 DPP9Q86TI2 863 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
PCNX1-215ENST00000557428 SPATA5Q8NB90 893 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 ARRDC4Q8NCT1 418 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 TRPV1Q8NER1 839 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 SSH1Q8WYL5 1049 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 FAM122AQ96E09 287 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 DHX36Q9H2U1 1008 aaKnown RBP9.92□□□□□ -0.82
PCNX1-215ENST00000557428 DNAJC18Q9H819 358 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 EMILIN3Q9NT22 766 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 PALD1Q9ULE6 856 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 AKAP2Q9Y2D5 859 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 RABGAP1Q9Y3P9 1069 aa9.92□□□□□ -0.82
PCNX1-215ENST00000557428 TRIM43BA6NCK2 446 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L15C9J2P7 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L13C9JLJ4 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L11C9JVI0 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L18D6R9N7 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L22D6RA61 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L17D6RBQ6 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L19D6RCP7 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L20D6RJB6 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 BAG3O95817 575 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 GH2P01242 217 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 USP17L24Q0WX57 530 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 GRIN2CQ14957 1233 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 RAB3GAP1Q15042 981 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 NAA16Q6N069 864 aaPredicted RBP9.91□□□□□ -0.82
PCNX1-215ENST00000557428 FAM9BQ8IZU0 186 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 TRIM43Q96BQ3 446 aaPredicted RBP9.91□□□□□ -0.82
PCNX1-215ENST00000557428 SMC4Q9NTJ3 1288 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 PLXNA1Q9UIW2 1896 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 TTC28Q96AY4 2481 aa9.91□□□□□ -0.82
PCNX1-215ENST00000557428 PQBP1O60828 265 aaKnown RBP9.9□□□□□ -0.82
PCNX1-215ENST00000557428 CYBAP13498 195 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 RAG1P15918 1043 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 PLCG2P16885 1265 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 DNAJB2P25686 324 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 GRB14Q14449 540 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 POTEEQ6S8J3 1075 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 GAS2L1Q99501 681 aaPredicted RBP9.9□□□□□ -0.82
PCNX1-215ENST00000557428 SNRKQ9NRH2 765 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 BTBD7Q9P203 1132 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 ZNF236Q9UL36 1845 aa9.9□□□□□ -0.82
PCNX1-215ENST00000557428 SRGAP3O43295 1099 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 CLTBP09497 229 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 VCAM1P19320 739 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 ADORA2AP29274 412 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 PLA2G5P39877 138 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 MCAMP43121 646 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 USP14P54578 494 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 EPHB4P54760 987 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 TLE2Q04725 743 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 FPGSQ05932 587 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 PLS1Q14651 629 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 CCDC85BQ15834 202 aaPredicted RBP9.89□□□□□ -0.83
PCNX1-215ENST00000557428 FAM47AQ5JRC9 791 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 TTC39AQ5SRH9 613 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 PRAMEF19Q5SWL8 479 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 ATF7IPQ6VMQ6 1270 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 CCDC129Q6ZRS4 1044 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 RPAP3Q9H6T3 665 aaPredicted RBP9.89□□□□□ -0.83
PCNX1-215ENST00000557428 COPRSQ9NQ92 184 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 GINM1Q9NU53 330 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 THEGQ9P2T0 379 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 NAV1Q8NEY1 1877 aa9.89□□□□□ -0.83
PCNX1-215ENST00000557428 ZNFX1Q9P2E3 1918 aaKnown RBP9.88□□□□□ -0.83
PCNX1-215ENST00000557428 SPDYE16A6NNV3 312 aaPredicted RBP9.88□□□□□ -0.83
PCNX1-215ENST00000557428 SEPT4O43236 478 aa9.88□□□□□ -0.83
PCNX1-215ENST00000557428 ANP32CO43423 234 aa9.88□□□□□ -0.83
PCNX1-215ENST00000557428 USP5P45974 858 aa9.88□□□□□ -0.83
PCNX1-215ENST00000557428 DYNLL1P63167 89 aaKnown RBP9.88□□□□□ -0.83
PCNX1-215ENST00000557428 LRRC41Q15345 812 aa9.88□□□□□ -0.83
PCNX1-215ENST00000557428 CATSPERGQ6ZRH7 1159 aa9.88□□□□□ -0.83
PCNX1-215ENST00000557428 FOXP4Q8IVH2 680 aaPredicted RBP9.88□□□□□ -0.83
PCNX1-215ENST00000557428 ACER1Q8TDN7 264 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms