RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 ZSWIM5Q9P217 1185 aa5.73□□□□□ -1.49
FOXN3-213ENST00000556916 TJP2Q9UDY2 1190 aa5.73□□□□□ -1.49
FOXN3-213ENST00000556916 GFRA2O00451 464 aa5.72□□□□□ -1.49
FOXN3-213ENST00000556916 AGMOQ6ZNB7 445 aa5.72□□□□□ -1.49
FOXN3-213ENST00000556916 TTC6Q86TZ1 520 aa5.72□□□□□ -1.49
FOXN3-213ENST00000556916 C1QL4Q86Z23 238 aa5.72□□□□□ -1.49
FOXN3-213ENST00000556916 CCDC120Q96HB5 630 aa5.72□□□□□ -1.49
FOXN3-213ENST00000556916 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
FOXN3-213ENST00000556916 TOX2Q96NM4 488 aa5.72□□□□□ -1.49
FOXN3-213ENST00000556916 MIR1-1HGQ9H1L0 117 aa5.72□□□□□ -1.49
FOXN3-213ENST00000556916 DNAJC25-GNG10A0A024R161 153 aa5.71□□□□□ -1.5
FOXN3-213ENST00000556916 RAC2P15153 192 aa5.71□□□□□ -1.5
FOXN3-213ENST00000556916 ETV3P41162 512 aa5.71□□□□□ -1.5
FOXN3-213ENST00000556916 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
FOXN3-213ENST00000556916 RALGPS1Q5JS13 557 aa5.71□□□□□ -1.5
FOXN3-213ENST00000556916 MEI1Q5TIA1 1274 aa5.71□□□□□ -1.5
FOXN3-213ENST00000556916 LRRC56Q8IYG6 542 aaPredicted RBP5.71□□□□□ -1.5
FOXN3-213ENST00000556916 FBXO15Q8NCQ5 510 aaPredicted RBP5.71□□□□□ -1.5
FOXN3-213ENST00000556916 ABHD4Q8TB40 342 aa5.71□□□□□ -1.5
FOXN3-213ENST00000556916 TACC3Q9Y6A5 838 aa5.71□□□□□ -1.5
FOXN3-213ENST00000556916 ESR1P03372 595 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 KRT1P04264 644 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 CFPP27918 469 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 HK2P52789 917 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 DAB2P98082 770 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 DNAJB8Q8NHS0 232 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 PIWIL2Q8TC59 973 aaKnown RBP5.7□□□□□ -1.5
FOXN3-213ENST00000556916 GIPC2Q8TF65 315 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 Q96M66 194 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 BCL2L13Q9BXK5 485 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 EPB41L4BQ9H329 900 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 TMEM59LQ9UK28 342 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 AK5Q9Y6K8 562 aa5.7□□□□□ -1.5
FOXN3-213ENST00000556916 WASH4PA8MWX3 477 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 NFIBO00712 420 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 CTSHP09668 335 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 C1QTNF9P0C862 333 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 TFE3P19532 575 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-213ENST00000556916 ERVFC1P60507 584 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 PDE4BQ07343 736 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 SLC6A19Q695T7 634 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 LCNL1Q6ZST4 164 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 TMPRSS7Q7RTY8 843 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 CREG2Q8IUH2 290 aa5.69□□□□□ -1.5
FOXN3-213ENST00000556916 ZSCAN18Q8TBC5 510 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-213ENST00000556916 ACSF2Q96CM8 615 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-213ENST00000556916 RPL6Q02878 288 aaKnown RBP5.68□□□□□ -1.5
FOXN3-213ENST00000556916 PSMD2Q13200 908 aa5.68□□□□□ -1.5
FOXN3-213ENST00000556916 TSNAXIP1Q2TAA8 658 aa5.68□□□□□ -1.5
FOXN3-213ENST00000556916 ANKLE2Q86XL3 938 aa5.68□□□□□ -1.5
FOXN3-213ENST00000556916 KCNK12Q9HB15 430 aa5.68□□□□□ -1.5
FOXN3-213ENST00000556916 DCP1AQ9NPI6 582 aaPredicted RBP5.68□□□□□ -1.5
FOXN3-213ENST00000556916 TLR6Q9Y2C9 796 aa5.68□□□□□ -1.5
FOXN3-213ENST00000556916 ERCC3P19447 782 aa5.67□□□□□ -1.5
FOXN3-213ENST00000556916 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
FOXN3-213ENST00000556916 XPCQ01831 940 aaPredicted RBP5.67□□□□□ -1.5
FOXN3-213ENST00000556916 GAB4Q2WGN9 574 aa5.67□□□□□ -1.5
FOXN3-213ENST00000556916 TMC4Q7Z404 712 aa5.67□□□□□ -1.5
FOXN3-213ENST00000556916 MCATQ8IVS2 390 aaKnown RBP5.67□□□□□ -1.5
FOXN3-213ENST00000556916 DTWD2Q8NBA8 298 aa5.67□□□□□ -1.5
FOXN3-213ENST00000556916 MYLIPQ8WY64 445 aa5.67□□□□□ -1.5
FOXN3-213ENST00000556916 JARID2Q92833 1246 aaPredicted RBP5.67□□□□□ -1.5
FOXN3-213ENST00000556916 DUSP13Q9UII6 198 aa5.67□□□□□ -1.5
FOXN3-213ENST00000556916 ADAM30Q9UKF2 790 aa5.67□□□□□ -1.5
FOXN3-213ENST00000556916 CORINQ9Y5Q5 1042 aa5.67□□□□□ -1.5
FOXN3-213ENST00000556916 NPIPB6E9PJ23 425 aa5.66□□□□□ -1.5
FOXN3-213ENST00000556916 HPXP02790 462 aa5.66□□□□□ -1.5
FOXN3-213ENST00000556916 ZSCAN22P10073 491 aaPredicted RBP5.66□□□□□ -1.5
FOXN3-213ENST00000556916 TRHRP34981 398 aaPredicted RBP5.66□□□□□ -1.5
FOXN3-213ENST00000556916 FAM13CQ8NE31 585 aa5.66□□□□□ -1.5
FOXN3-213ENST00000556916 PPP1R13LQ8WUF5 828 aa5.66□□□□□ -1.5
FOXN3-213ENST00000556916 CYB5D2Q8WUJ1 264 aa5.66□□□□□ -1.5
FOXN3-213ENST00000556916 DUSP15Q9H1R2 295 aaPredicted RBP5.66□□□□□ -1.5
FOXN3-213ENST00000556916 ADAMTS10Q9H324 1103 aa5.66□□□□□ -1.5
FOXN3-213ENST00000556916 TRIT1Q9H3H1 467 aaKnown RBP5.66□□□□□ -1.5
FOXN3-213ENST00000556916 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 F6X3S4 739 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 CENPBP07199 599 aaPredicted RBP5.65□□□□□ -1.5
FOXN3-213ENST00000556916 ZNF16P17020 682 aaPredicted RBP5.65□□□□□ -1.5
FOXN3-213ENST00000556916 PLCG1P19174 1290 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 LTKP29376 864 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 EGR3Q06889 387 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 RNF32Q9H0A6 362 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 CD320Q9NPF0 282 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 GPATCH2Q9NW75 528 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 CEP131Q9UPN4 1083 aa5.65□□□□□ -1.5
FOXN3-213ENST00000556916 TCAF2A6NFQ2 919 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 UPK3BL1B0FP48 263 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 UPK3BL2E5RIL1 263 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 BPNT1O95861 308 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 TMEM253P0C7T8 217 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 RLBP1P12271 317 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 KCNA10Q16322 511 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 BNC2Q6ZN30 1099 aaPredicted RBP5.64□□□□□ -1.51
FOXN3-213ENST00000556916 ATG14Q6ZNE5 492 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 TSPYL5Q86VY4 417 aaPredicted RBP5.64□□□□□ -1.51
FOXN3-213ENST00000556916 PHC3Q8NDX5 983 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 RGS22Q8NE09 1264 aa5.64□□□□□ -1.51
FOXN3-213ENST00000556916 NOC4LQ9BVI4 516 aaKnown RBP5.64□□□□□ -1.51
FOXN3-213ENST00000556916 GPR62Q9BZJ7 368 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms