RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 ZNRF3Q9ULT6 936 aa6.66□□□□□ -1.34
FCF1-208ENST00000556814 ATF4P18848 351 aaPredicted RBP6.65□□□□□ -1.34
FCF1-208ENST00000556814 NASPP49321 788 aaPredicted RBP6.65□□□□□ -1.34
FCF1-208ENST00000556814 NKG7Q16617 165 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 CPSF6Q16630 551 aaKnown RBP eCLIP6.65□□□□□ -1.34
FCF1-208ENST00000556814 CYP27C1Q4G0S4 372 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 NAALADL2Q58DX5 795 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 DUSP27Q5VZP5 1158 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 SLFN12Q8IYM2 578 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 FAM13CQ8NE31 585 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 ASIC4Q96FT7 647 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 MFSD14AQ96MC6 490 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 CRBNQ96SW2 442 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 ATG3Q9NT62 314 aa6.65□□□□□ -1.34
FCF1-208ENST00000556814 DBX1A6NMT0 343 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 CDK5R2Q13319 367 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 PRAMEF13Q5VWM6 474 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 FBXW10Q5XX13 1052 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 ZNF746Q6NUN9 644 aaPredicted RBP6.64□□□□□ -1.35
FCF1-208ENST00000556814 OGFOD3Q6PK18 319 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 UBE3DQ7Z6J8 389 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 FBXL6Q8N531 539 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 CPLX3Q8WVH0 158 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 PRDM10Q9NQV6 1147 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 KLHL3Q9UH77 587 aa6.64□□□□□ -1.35
FCF1-208ENST00000556814 SLC22A31A6NKX4 558 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 FAM87AP0C7U9 286 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 SHISA5Q8N114 240 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 RBBP8NLQ8NC74 664 aaPredicted RBP6.63□□□□□ -1.35
FCF1-208ENST00000556814 OR6P1Q8NGX9 317 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 TMEM40Q8WWA1 233 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 GATA6Q92908 595 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 GMLQ99445 158 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 DUSP23Q9BVJ7 150 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 SRRTQ9BXP5 876 aaKnown RBP6.63□□□□□ -1.35
FCF1-208ENST00000556814 PPT2Q9UMR5 302 aa6.63□□□□□ -1.35
FCF1-208ENST00000556814 WDR64B1ANS9 1081 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 RAG1P15918 1043 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 DNAJA1P31689 397 aaKnown RBP6.62□□□□□ -1.35
FCF1-208ENST00000556814 ADMP35318 185 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 EIF6P56537 245 aaKnown RBP6.62□□□□□ -1.35
FCF1-208ENST00000556814 CDCP2Q5VXM1 449 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 LETMD1Q6P1Q0 360 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 PHACTR4Q8IZ21 702 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 TOP6BLQ8N6T0 577 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 CYB5D2Q8WUJ1 264 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 CCDC74BQ96LY2 380 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 MIPEPQ99797 713 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.35
FCF1-208ENST00000556814 OSBPL1AQ9BXW6 950 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 CCDC39Q9UFE4 941 aa6.62□□□□□ -1.35
FCF1-208ENST00000556814 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
FCF1-208ENST00000556814 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 F13BP05160 661 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 SSBP05455 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
FCF1-208ENST00000556814 CYP7A1P22680 504 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 CCNFP41002 786 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 CHMP4BP1P59074 171 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 OVOS1Q6IE37 1185 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 XAGE3Q8WTP9 111 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 ATG4CQ96DT6 458 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 COX4I2Q96KJ9 171 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 TM9SF2Q99805 663 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 DPH2Q9BQC3 489 aaPredicted RBP6.61□□□□□ -1.35
FCF1-208ENST00000556814 CNNM2Q9H8M5 875 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 GTF2IRD1Q9UHL9 959 aa6.61□□□□□ -1.35
FCF1-208ENST00000556814 UPK3BL1B0FP48 263 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 UPK3BL2E5RIL1 263 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 SLITRK5O94991 958 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 ETV3P41162 512 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 BUD31P41223 144 aaPredicted RBP6.6□□□□□ -1.35
FCF1-208ENST00000556814 ARSHQ5FYA8 562 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 INTS3Q68E01 1043 aaKnown RBP6.6□□□□□ -1.35
FCF1-208ENST00000556814 CCDC81Q6ZN84 652 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 ZNF765Q7L2R6 523 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 NLRC3Q7RTR2 1065 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 TAB3Q8N5C8 712 aaPredicted RBP6.6□□□□□ -1.35
FCF1-208ENST00000556814 CEP131Q9UPN4 1083 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 LEMD3Q9Y2U8 911 aa6.6□□□□□ -1.35
FCF1-208ENST00000556814 CARMIL2Q6F5E8 1435 aa6.59□□□□□ -1.35
FCF1-208ENST00000556814 FAM170BA6NMN3 283 aa6.59□□□□□ -1.35
FCF1-208ENST00000556814 RGS13O14921 159 aa6.59□□□□□ -1.35
FCF1-208ENST00000556814 DNAJA2O60884 412 aa6.59□□□□□ -1.35
FCF1-208ENST00000556814 PAPLNO95428 1278 aa6.59□□□□□ -1.35
FCF1-208ENST00000556814 NME1P15531 152 aaKnown RBP6.59□□□□□ -1.35
FCF1-208ENST00000556814 GBP1P32455 592 aa6.59□□□□□ -1.35
FCF1-208ENST00000556814 GIPRP48546 466 aa6.59□□□□□ -1.35
FCF1-208ENST00000556814 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
FCF1-208ENST00000556814 MSMPQ1L6U9 139 aa6.59□□□□□ -1.35
FCF1-208ENST00000556814 PRDM5Q9NQX1 630 aaPredicted RBP6.59□□□□□ -1.35
FCF1-208ENST00000556814 TPX2Q9ULW0 747 aaKnown RBP6.59□□□□□ -1.35
FCF1-208ENST00000556814 IGF2BP3O00425 579 aaKnown RBP eCLIP6.58□□□□□ -1.36
FCF1-208ENST00000556814 TNFRSF10CO14798 259 aa6.58□□□□□ -1.36
FCF1-208ENST00000556814 LEFTY1O75610 366 aa6.58□□□□□ -1.36
FCF1-208ENST00000556814 FGRP09769 529 aa6.58□□□□□ -1.36
FCF1-208ENST00000556814 LSRQ86X29 649 aaPredicted RBP6.58□□□□□ -1.36
FCF1-208ENST00000556814 SHDQ96IW2 340 aa6.58□□□□□ -1.36
FCF1-208ENST00000556814 KIF2CQ99661 725 aa6.58□□□□□ -1.36
FCF1-208ENST00000556814 TANGO6Q9C0B7 1094 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms