RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 RIOK1Q9BRS2 568 aaKnown RBP11.52□□□□□ -0.57
MARK3-211ENST00000556744 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.57
MARK3-211ENST00000556744 ECHDC1Q9NTX5 307 aa11.52□□□□□ -0.57
MARK3-211ENST00000556744 KCNH4Q9UQ05 1017 aa11.52□□□□□ -0.57
MARK3-211ENST00000556744 SIPA1L1O43166 1804 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 CTNND1O60716 968 aaKnown RBP11.51□□□□□ -0.57
MARK3-211ENST00000556744 PDE6AP16499 860 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 GTF2A2P52657 109 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 PICALMQ13492 652 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 TUSC1Q2TAM9 212 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 POTEEQ6S8J3 1075 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 TNS4Q8IZW8 715 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 BRI3BPQ8WY22 251 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 NOL10Q9BSC4 688 aaKnown RBP11.51□□□□□ -0.57
MARK3-211ENST00000556744 BOLA2Q9H3K6 86 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 ZCCHC17Q9NP64 241 aaKnown RBP11.51□□□□□ -0.57
MARK3-211ENST00000556744 PAG1Q9NWQ8 432 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 PI4KBQ9UBF8 816 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 HERC5Q9UII4 1024 aaKnown RBP11.51□□□□□ -0.57
MARK3-211ENST00000556744 FLT1P17948 1338 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 SALL3Q9BXA9 1300 aa11.51□□□□□ -0.57
MARK3-211ENST00000556744 GOLIM4O00461 696 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 CXCL11O14625 94 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 DYNLL1P63167 89 aaKnown RBP11.5□□□□□ -0.57
MARK3-211ENST00000556744 MOGSQ13724 837 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 SLC9C2Q5TAH2 1124 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 FOXP4Q8IVH2 680 aaPredicted RBP11.5□□□□□ -0.57
MARK3-211ENST00000556744 ZSCAN29Q8IWY8 852 aaPredicted RBP11.5□□□□□ -0.57
MARK3-211ENST00000556744 SCYL3Q8IZE3 742 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 GCC1Q96CN9 775 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 PHIPQ8WWQ0 1821 aa11.5□□□□□ -0.57
MARK3-211ENST00000556744 GPR25O00155 361 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 SPTLC1O15269 473 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 TBC1D8O95759 1140 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 SLURP2P0DP57 97 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 CETPP11597 493 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 ADD2P35612 726 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 SNAPC2Q13487 334 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 UBE3CQ15386 1083 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 OTUD7BQ6GQQ9 843 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 EDC3Q96F86 508 aaKnown RBP11.49□□□□□ -0.57
MARK3-211ENST00000556744 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 TTC41PQ6P2S7 1318 aa11.49□□□□□ -0.57
MARK3-211ENST00000556744 MYH7P12883 1935 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 CCL15-CCL14A0A0B4J2E2 113 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 FAM205CA6NFA0 338 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 PTPRAP18433 802 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 RRP1BQ14684 758 aaKnown RBP11.48□□□□□ -0.57
MARK3-211ENST00000556744 CCL15Q16663 113 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 MAPKAPK5Q8IW41 473 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 SMC5Q8IY18 1101 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 PI4K2BQ8TCG2 481 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 ZNF296Q8WUU4 475 aaPredicted RBP11.48□□□□□ -0.57
MARK3-211ENST00000556744 DNAJC2Q99543 621 aaKnown RBP11.48□□□□□ -0.57
MARK3-211ENST00000556744 EHD4Q9H223 541 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 DNAJC18Q9H819 358 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 SUPT16HQ9Y5B9 1047 aaKnown RBP11.48□□□□□ -0.57
MARK3-211ENST00000556744 ZNF532Q9HCE3 1301 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 DOCK1Q14185 1865 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 MYH1P12882 1939 aa11.48□□□□□ -0.57
MARK3-211ENST00000556744 PTPRFP10586 1907 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 DDX60LQ5H9U9 1706 aaKnown RBP11.47□□□□□ -0.57
MARK3-211ENST00000556744 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 KDM4AO75164 1064 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 CAP2P40123 477 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 USP46P62068 366 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
MARK3-211ENST00000556744 LAPTM4BQ86VI4 370 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 FAM43AQ8N2R8 423 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.47□□□□□ -0.57
MARK3-211ENST00000556744 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.47□□□□□ -0.57
MARK3-211ENST00000556744 STAP2Q9UGK3 403 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
MARK3-211ENST00000556744 PALD1Q9ULE6 856 aa11.47□□□□□ -0.57
MARK3-211ENST00000556744 A0A0G2JLL6 359 aaPredicted RBP11.46□□□□□ -0.57
MARK3-211ENST00000556744 BTBD19C9JJ37 291 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 GABPAQ06546 454 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 CRHR2Q13324 411 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 MCM6Q14566 821 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 PPP2R2DQ66LE6 453 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 ZSCAN25Q6NSZ9 544 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 GPAT2Q6NUI2 795 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 TATDN1Q6P1N9 297 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 PRRT2Q7Z6L0 340 aaPredicted RBP11.46□□□□□ -0.57
MARK3-211ENST00000556744 ANKRD23Q86SG2 305 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 EXOC6Q8TAG9 804 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 OTUD7AQ8TE49 926 aaPredicted RBP11.46□□□□□ -0.57
MARK3-211ENST00000556744 GPATCH3Q96I76 525 aa11.46□□□□□ -0.57
MARK3-211ENST00000556744 PICK1Q9NRD5 415 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms