RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 HERC5Q9UII4 1024 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 DBNLQ9UJU6 430 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 ATAD5Q96QE3 1844 aa9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 FOCADQ5VW36 1801 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 A0A0G2JLL6 359 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 APBB1O00213 710 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 CYP7A1P22680 504 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 HOXD10P28358 340 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 PRMT2P55345 433 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 PPP4CP60510 307 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 LACTBP83111 547 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 MAP3K12Q12852 859 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 TTF1Q15361 905 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 SLC9C1Q4G0N8 1177 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 TMED8Q6PL24 325 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 C17orf99Q6UX52 265 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 PRRT2Q7Z6L0 340 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 MAPKAPK5Q8IW41 473 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 CRACR2BQ8N4Y2 399 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 TGFBRAP1Q8WUH2 860 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 KIF1BPQ96EK5 621 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 BCL11AQ9H165 835 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 AS3MTQ9HBK9 375 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 PI4KBQ9UBF8 816 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 AFG3L2Q9Y4W6 797 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 CDK5RAP2Q96SN8 1893 aa9.36□□□□□ -0.91
HNRNPC-226ENST00000556628 PHIPQ8WWQ0 1821 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 PTPRFP10586 1907 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 GRXCR2A6NFK2 248 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 TRIM75PA6NK02 468 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 USP17L5A8MUK1 530 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 FMNL1O95466 1100 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 IFIT2P09913 472 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 CAP2P40123 477 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 USP5P45974 858 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 PABPC4Q13310 644 aaKnown RBP eCLIP9.35□□□□□ -0.919e-62■□□□□ 10
HNRNPC-226ENST00000556628 FOXP4Q8IVH2 680 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 SMCR8Q8TEV9 937 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 LRCH3Q96II8 777 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 IL1RAPL2Q9NP60 686 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 PIH1D3Q9NQM4 214 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 TSR3Q9UJK0 312 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 PNMA3Q9UL41 463 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 SLC45A1Q9Y2W3 748 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 PTCH2Q9Y6C5 1203 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 MYH1P12882 1939 aa9.35□□□□□ -0.91
HNRNPC-226ENST00000556628 FLT1P17948 1338 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 ZSWIM8A7E2V4 1837 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 CYP2C8P10632 490 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 PSMC4P43686 418 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 DYNLL1P63167 89 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 MOGSQ13724 837 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 SLC4A8Q2Y0W8 1093 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 MAGEB6Q8N7X4 407 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 PROCA1Q8NCQ7 364 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 ZNF280CQ8ND82 737 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 RAET1EQ8TD07 263 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 DDX12PQ92771 950 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 ARMC5Q96C12 935 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 AGTPBP1Q9UPW5 1226 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 RBBP6Q7Z6E9 1792 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 MGAMO43451 1857 aa9.34□□□□□ -0.91
HNRNPC-226ENST00000556628 ASNSP08243 561 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 OSBPP22059 807 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 FCGRTP55899 365 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 SPP2Q13103 211 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 PDE3AQ14432 1141 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 ADGRA1Q86SQ6 560 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 CCDC84Q86UT8 332 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 MIGA1Q8NAN2 632 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 ARHGAP39Q9C0H5 1083 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 GINM1Q9NU53 330 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 SRRDQ9UH36 339 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 SAP30BPQ9UHR5 308 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 PALD1Q9ULE6 856 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 NDUFB9Q9Y6M9 179 aa9.33□□□□□ -0.92
HNRNPC-226ENST00000556628 MYPNQ86TC9 1320 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 ADGRA2Q96PE1 1338 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 LOC285556D6RIA3 1793 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 BCRP11274 1271 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 CAP1Q01518 475 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 TTC6Q86TZ1 520 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 ZNF333Q96JL9 665 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 DNAJC2Q99543 621 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 ANTXR1Q9H6X2 564 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 BIN2Q9UBW5 565 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-226ENST00000556628 SIPA1L1O43166 1804 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms